Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00376
         (372 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p pro...   131   2e-31
AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB ...   131   2e-31
AE014296-2959|AAN11699.1|  419|Drosophila melanogaster CG32182-P...    29   2.6  
AE014298-260|AAF45668.1|  188|Drosophila melanogaster CG14799-PA...    27   6.0  

>AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p
           protein.
          Length = 205

 Score =  131 bits (317), Expect = 2e-31
 Identities = 60/110 (54%), Positives = 80/110 (72%)
 Frame = +2

Query: 2   NSARVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCN 181
           N   VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++LRKRCN
Sbjct: 6   NRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCN 65

Query: 182 VQSCSWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
           V      F F +      +  +  +PHKT+RG+ AL RLR +DG P P+D
Sbjct: 66  VNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYD 115


>AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB
           protein.
          Length = 205

 Score =  131 bits (317), Expect = 2e-31
 Identities = 60/110 (54%), Positives = 80/110 (72%)
 Frame = +2

Query: 2   NSARVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCN 181
           N   VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++LRKRCN
Sbjct: 6   NRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCN 65

Query: 182 VQSCSWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
           V      F F +      +  +  +PHKT+RG+ AL RLR +DG P P+D
Sbjct: 66  VNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYD 115


>AE014296-2959|AAN11699.1|  419|Drosophila melanogaster CG32182-PA
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 289 KSILATLCFVWDIPLTVFHRILDGALKWKGPR 194
           K +     F W   LTV + + DG++KW   R
Sbjct: 278 KEVFRLQSFAWHSQLTVHYDVADGSVKWMPQR 309


>AE014298-260|AAF45668.1|  188|Drosophila melanogaster CG14799-PA
           protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +3

Query: 51  RQSSPRSFSKGTKLLWFAANKS--TSLATSLGTNSSLCHSCVRGATCNPARGPFHFRAPS 224
           RQ     ++  ++  W     +  T+L T++ TN+ LC++    AT    +        S
Sbjct: 63  RQQGKMYYNSSSRPFWRKCRSAAPTNLMTTIPTNNDLCNTAA-AATWLSGQMQSAKLDRS 121

Query: 225 KILWKTVRGMSHTKQSVARMLLGGYV 302
           +ILW+ ++    T   +  +++  +V
Sbjct: 122 RILWRKIKHHLTTTTIIIIIIIAAFV 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,748,910
Number of Sequences: 53049
Number of extensions: 360490
Number of successful extensions: 1175
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)