Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00376
         (372 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   1.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   4.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   4.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   8.2  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 138 LKKLPEMLICSQRTTTTLFPSRRTL 64
           LK L + L+C ++ +TT+ P+ + +
Sbjct: 68  LKLLSDGLMCVEKVSTTIVPTTQEI 92


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 189 PARGPFHFRAPSKI 230
           P  G F F+AP KI
Sbjct: 56  PPVGKFRFKAPQKI 69


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 189 PARGPFHFRAPSKI 230
           P  G F F+AP KI
Sbjct: 56  PPVGKFRFKAPQKI 69


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 210 NGKVHEQDCTLH 175
           NGK++   C LH
Sbjct: 121 NGKIYANHCELH 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,032
Number of Sequences: 438
Number of extensions: 2157
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)