Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00375
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.37 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
 Frame = +3

Query: 561  PSLVTHWTLIHRQSITS--IARWKQLIRWQQSYGEY-THQSCSCFRDCQQSFL 710
            PS   HW      S T+       QLI  +   G+Y  H+SCS F  C    L
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSSFYVCVNGHL 1229


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 393 AFANQEQSPSYNFAKERPDLLMQLNP 470
           A   +EQ+  Y  A+    L MQL P
Sbjct: 519 ALGREEQAKYYELARRERQLHMQLYP 544


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 393 AFANQEQSPSYNFAKERPDLLMQLNP 470
           A   +EQ+  Y  A+    L MQL P
Sbjct: 411 ALGREEQAKYYELARRERQLHMQLYP 436


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 456 MQLNPALLQHNEGQMQQLKFMFSF 527
           +  N +  + NEG+  QL + F+F
Sbjct: 306 INFNKSSSEENEGKTTQLDYFFTF 329


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 456 MQLNPALLQHNEGQMQQLKFMFSF 527
           +  N +  + NEG+  QL + F+F
Sbjct: 306 INFNKSSSEENEGKTTQLDYFFTF 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,975
Number of Sequences: 336
Number of extensions: 3528
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)