Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00375
(747 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014990-1|AAH14990.1| 356|Homo sapiens stomatin (EPB72)-like 2... 31 4.4
BC010152-1|AAH10152.1| 356|Homo sapiens stomatin (EPB72)-like 2... 31 4.4
BC003025-1|AAH03025.1| 356|Homo sapiens stomatin (EPB72)-like 2... 31 4.4
BC002442-1|AAH02442.1| 356|Homo sapiens stomatin (EPB72)-like 2... 31 4.4
AL353795-6|CAH70998.1| 356|Homo sapiens stomatin (EPB72)-like 2... 31 4.4
AK223102-1|BAD96822.1| 356|Homo sapiens stomatin (EPB72)-like 2... 31 4.4
AK027405-1|BAB55091.1| 356|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF282596-1|AAF91466.1| 356|Homo sapiens stomatin-like protein 2... 31 4.4
AF190167-1|AAF09142.1| 356|Homo sapiens membrane associated pro... 31 4.4
BC022443-1|AAH22443.1| 192|Homo sapiens ZCCHC10 protein protein. 31 5.8
BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domai... 31 5.8
AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens ... 31 5.8
>BC014990-1|AAH14990.1| 356|Homo sapiens stomatin (EPB72)-like 2
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>BC010152-1|AAH10152.1| 356|Homo sapiens stomatin (EPB72)-like 2
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>BC003025-1|AAH03025.1| 356|Homo sapiens stomatin (EPB72)-like 2
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>BC002442-1|AAH02442.1| 356|Homo sapiens stomatin (EPB72)-like 2
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>AL353795-6|CAH70998.1| 356|Homo sapiens stomatin (EPB72)-like 2
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>AK223102-1|BAD96822.1| 356|Homo sapiens stomatin (EPB72)-like 2
variant protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>AK027405-1|BAB55091.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ14499 fis, clone NT2RM1000080, weakly similar to
UNC-1 PROTEIN. ).
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>AF282596-1|AAF91466.1| 356|Homo sapiens stomatin-like protein 2
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>AF190167-1|AAF09142.1| 356|Homo sapiens membrane associated
protein SLP-2 protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 VKQSVESLTDSEVRESSSI--SPDSVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQS 416
VK+S++ ++E R+ +++ S + +A+++ +Q + EKA + A E S
Sbjct: 186 VKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEAS 245
Query: 417 PSYNFAKERPDLLMQLNPALLQHN 488
AK + + + L AL QHN
Sbjct: 246 AVLAKAKAKAEAIRILAAALTQHN 269
>BC022443-1|AAH22443.1| 192|Homo sapiens ZCCHC10 protein protein.
Length = 192
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 346 SANASMSTAL*TESGDMDDDSRTSESVKDSTDCLTDRQNPQ 224
S+++S S+ + S D D DS +S S STD +D + P+
Sbjct: 147 SSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPK 187
>BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domain
containing 10 protein.
Length = 170
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 346 SANASMSTAL*TESGDMDDDSRTSESVKDSTDCLTDRQNPQ 224
S+++S S+ + S D D DS +S S STD +D + P+
Sbjct: 125 SSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPK 165
>AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ20094 fis, clone COL04320. ).
Length = 170
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 346 SANASMSTAL*TESGDMDDDSRTSESVKDSTDCLTDRQNPQ 224
S+++S S+ + S D D DS +S S STD +D + P+
Sbjct: 125 SSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPK 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,195,710
Number of Sequences: 237096
Number of extensions: 2087933
Number of successful extensions: 4031
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4031
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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