Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00374
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 159 5e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 151 8e-38
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 128 8e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 127 1e-30
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 95 1e-20
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 52 7e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 9e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 33 0.043
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.40
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.92
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.2
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 6.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 8.6
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 8.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 159 bits (385), Expect = 5e-40
Identities = 86/162 (53%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SS
Sbjct: 60 NPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISS 119
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 615
MVL KM+ETAEAYLG V +AV+TVP + + K +A +N
Sbjct: 120 MVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK-DAGLIAGLNVLRIINEPTAAA 178
Query: 616 XXXXXXXXXENEM-YLSLTSAGGTFDVSILTIEDGIFEVKST 738
+ E L GGTFDVS+LTIE+GIFEVK+T
Sbjct: 179 IAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKAT 220
Score = 107 bits (257), Expect = 2e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 104 bits (249), Expect = 2e-23
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 677
PAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGG
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGG 200
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 151 bits (367), Expect = 8e-38
Identities = 82/162 (50%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SS
Sbjct: 60 NPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISS 119
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 615
MVL KM+E+AEA+LG V +AV+TVP + + K +A +N
Sbjct: 120 MVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK-DAGLIAGLNVLRIINEPTAAA 178
Query: 616 XXXXXXXXXENEM-YLSLTSAGGTFDVSILTIEDGIFEVKST 738
++E L GGTFDVS+LTIE+GIFEVK+T
Sbjct: 179 IAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKAT 220
Score = 107 bits (257), Expect = 2e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 101 bits (241), Expect = 1e-22
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 677
PAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGG
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGG 200
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 128 bits (309), Expect = 8e-31
Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+
Sbjct: 64 NPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISA 123
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 615
MVLTKMKE +EA L K V+ AVITVP + + ++A +N
Sbjct: 124 MVLTKMKEISEAKLNKRVEKAVITVP-AYFSDSQRAATKDAGAIAGLNVLRIINEPTAAA 182
Query: 616 XXXXXXXXXEN-EMYLSLTSAGGTFDVSILTIEDGIFEVKST 738
+ + L GGTFDVS+L I+ G+FEV +T
Sbjct: 183 IAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLAT 224
Score = 96.7 bits (230), Expect = 3e-21
Identities = 46/56 (82%), Positives = 49/56 (87%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 677
PAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGG
Sbjct: 149 PAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGG 204
Score = 95.5 bits (227), Expect = 7e-21
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 127 bits (307), Expect = 1e-30
Identities = 67/161 (41%), Positives = 98/161 (60%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 615
M+L+KMK+TAEAYLGK V +AV+TVP + + K ++A +N
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK-DAGTIAGLNVIRIVNEPTAAA 211
Query: 616 XXXXXXXXXENEMYLSLTSAGGTFDVSILTIEDGIFEVKST 738
+ + GGTFDVS+L+I++G+FEV +T
Sbjct: 212 IAYGLDKTDTEKHIVVYDLGGGTFDVSLLSIDNGVFEVLAT 252
Score = 96.3 bits (229), Expect = 4e-21
Identities = 43/56 (76%), Positives = 53/56 (94%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 677
PAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGG
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGG 232
Score = 95.9 bits (228), Expect = 5e-21
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 94.7 bits (225), Expect = 1e-20
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 615
+L+KM+ETA YLGK V+NAV+TVP D ++ + A
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVP---AYFNDSQRQATKAAGAIAGLNVLRVVNEPTA 222
Query: 616 XXXXXXXXXENEMYLSLTS-AGGTFDVSILTIEDGIFEVKST 738
+N+ +++ GGTFD+SIL + +G+FEV+ST
Sbjct: 223 AALAYGLDKKNDAIVAVFDLGGGTFDISILELNNGVFEVRST 264
Score = 88.6 bits (210), Expect = 8e-19
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 677
PAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGG
Sbjct: 191 PAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGG 244
Score = 69.3 bits (162), Expect = 5e-13
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAR 256
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 257 TPTTQY 274
P +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 52.4 bits (120), Expect = 7e-08
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLG- 674
PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G
Sbjct: 149 PAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGH 208
Query: 675 GRYLRRVHPYHRGWY 719
Y + + RG +
Sbjct: 209 SNYSVSIVEFSRGQF 223
Score = 49.2 bits (112), Expect = 6e-07
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +2
Query: 77 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 432
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVP 513
+ TK+K AEA L +V + VI++P
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.9 bits (94), Expect = 9e-05
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 495 CSYHGPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 674
C P YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 166 CVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFG 225
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAR 256
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ R
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVR 81
Score = 31.5 bits (68), Expect = 0.13
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFF 417
N +N++ + + L+G+ ++ T+ H+ V+ G+ K+ + ++ K
Sbjct: 82 NADNSVTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILT 139
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 513
E S L ++ E+AE +LG V V++VP
Sbjct: 140 AHEASVRHLRRLTESAEDFLGTKVNGCVMSVP 171
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 33.1 bits (72), Expect = 0.043
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTPTT 268
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N R P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 269 QYSMPNV 289
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.9 bits (64), Expect = 0.40
Identities = 31/137 (22%), Positives = 56/137 (40%)
Frame = -2
Query: 713 SSMVRMDTSKVPPAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLS 534
SS + +S + + + + S SS L T S S+S I S + F S
Sbjct: 554 SSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSAS 607
Query: 533 LRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLT 354
+ I++ T+L + S + +S+ + S +LSS + + + SL+
Sbjct: 608 TSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLS 664
Query: 353 TSKGQCFMSACTVASSN 303
T S+ T+ SS+
Sbjct: 665 TYSSSVIPSSSTLVSSS 681
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.92
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 84 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 179
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 1.2
Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Frame = -2
Query: 728 TSKIPSSMVRMDTSKVPPAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCI 549
++ I SS V ++ + + V + +S+ V T + +SS ++ S + +
Sbjct: 3225 STAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNT 3284
Query: 548 FCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGL 369
++ + T IT+ T+ S + S+ +TSS S+P+ ++ +L
Sbjct: 3285 STPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNS 3344
Query: 368 PPSLTTSKGQCFMSACTVASSN-LRPMRRLASNIVLLGFSP 249
++T+S S+ V SS+ L + S+ V+ +P
Sbjct: 3345 STAITSS--SILNSSTPVTSSSVLNSSTPITSSTVVNSSTP 3383
Score = 27.5 bits (58), Expect = 2.1
Identities = 33/160 (20%), Positives = 68/160 (42%)
Frame = -2
Query: 728 TSKIPSSMVRMDTSKVPPAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCI 549
++ I SS V ++ + + V + +S+ V + + +SS ++ S + +
Sbjct: 813 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNT 872
Query: 548 FCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGL 369
++ + T IT+ V S + S+ +TSS S+P+ ++ +L
Sbjct: 873 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 932
Query: 368 PPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGFSP 249
+T+S G + T +SS L + S+ VL +P
Sbjct: 933 STPITSSTGLNTSTPIT-SSSVLNSSTPITSSTVLNSSTP 971
Score = 26.2 bits (55), Expect = 4.9
Identities = 25/127 (19%), Positives = 54/127 (42%)
Frame = -2
Query: 728 TSKIPSSMVRMDTSKVPPAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCI 549
++ I SS V ++ + + V + +S+ V T + +SS ++ S + +
Sbjct: 1533 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNT 1592
Query: 548 FCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGL 369
++ + T IT+ + S + S+ +TSS S+P+ ++ L
Sbjct: 1593 STPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNT 1652
Query: 368 PPSLTTS 348
P +T+S
Sbjct: 1653 SPPITSS 1659
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 170 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 12
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 200 AFTDTERLIGDAAKNQVARTPTTQYSMPNVSSDV 301
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.4 bits (53), Expect = 8.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 262 WGSRHLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 113
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,325,962
Number of Sequences: 5004
Number of extensions: 73545
Number of successful extensions: 259
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -