Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00373
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000519D6B Cluster: PREDICTED: similar to C04G6.4; n...    67   3e-10
UniRef50_Q179E7 Cluster: Putative uncharacterized protein; n=1; ...    55   1e-06
UniRef50_UPI00005843C9 Cluster: PREDICTED: hypothetical protein;...    49   9e-05
UniRef50_Q5XJA3 Cluster: Zgc:103484; n=13; Euteleostomi|Rep: Zgc...    48   2e-04
UniRef50_A7SBY1 Cluster: Predicted protein; n=1; Nematostella ve...    40   0.042
UniRef50_Q86Y42 Cluster: Proline-rich coiled-coil protein 1; n=2...    38   0.13 
UniRef50_UPI0000D56A39 Cluster: PREDICTED: similar to C04G6.4; n...    38   0.17 
UniRef50_A6DSQ8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_Q6LN61 Cluster: Putative uncharacterized protein VP2297...    32   8.5  

>UniRef50_UPI0000519D6B Cluster: PREDICTED: similar to C04G6.4; n=2;
           Apocrita|Rep: PREDICTED: similar to C04G6.4 - Apis
           mellifera
          Length = 381

 Score = 66.9 bits (156), Expect = 3e-10
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +2

Query: 113 GYSLTVGSIMADSLQVPHTDWQEASTGVSRREILLLAAKSLAGSYK 250
           G S+TVGS+MA+SLQV H +W  A TG+SRR+I+LLA +SLAG YK
Sbjct: 330 GLSVTVGSLMANSLQVNHNEWHHALTGISRRDIILLAVQSLAGIYK 375


>UniRef50_Q179E7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 369

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 21/47 (44%), Positives = 35/47 (74%)
 Frame = +2

Query: 113 GYSLTVGSIMADSLQVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
           G+++T+GS+MA +L  PHT+W +  T +SR +++L AAK +A  YK+
Sbjct: 306 GFAVTIGSVMAKNLNTPHTEWHKTYTSISRSDMILCAAKIVATLYKK 352


>UniRef50_UPI00005843C9 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 375

 Score = 48.8 bits (111), Expect = 9e-05
 Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +2

Query: 113 GYSLTVGSIMADSLQ-VPHTDWQEASTGVSRREILLLAAKSLAGSYK 250
           G ++T+G ++  S Q +P +DW +A TG+SR+E++  AA SLAG+YK
Sbjct: 319 GLAVTIGEVIERSNQGIPRSDWHKAFTGMSRQEMIYSAAISLAGTYK 365


>UniRef50_Q5XJA3 Cluster: Zgc:103484; n=13; Euteleostomi|Rep:
           Zgc:103484 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 435

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +2

Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYK 250
           G  +TVG ++  ++  V  TDW +A TG+SRR+++  AAK+LAG YK
Sbjct: 381 GLLVTVGEVLERNVPNVSRTDWHQAFTGMSRRQMIYSAAKALAGMYK 427


>UniRef50_A7SBY1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 233

 Score = 39.9 bits (89), Expect = 0.042
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +2

Query: 113 GYSLTVGSIMADSLQVPHTDWQEASTGVSRREILLLAAKSLAGSYK 250
           G S T+  ++  S    H DWQ    G SR++IL +AA++LAG Y+
Sbjct: 172 GLSFTLAEVILGSGHT-HGDWQSLLGGCSRKQILTVAARTLAGQYR 216


>UniRef50_Q86Y42 Cluster: Proline-rich coiled-coil protein 1; n=23;
           Tetrapoda|Rep: Proline-rich coiled-coil protein 1 - Homo
           sapiens (Human)
          Length = 464

 Score = 38.3 bits (85), Expect = 0.13
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSL 235
           G  +TVG ++  SL  V  TDW  A TG+SRR+++  AA+++
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAI 432


>UniRef50_UPI0000D56A39 Cluster: PREDICTED: similar to C04G6.4; n=1;
           Tribolium castaneum|Rep: PREDICTED: similar to C04G6.4 -
           Tribolium castaneum
          Length = 355

 Score = 37.9 bits (84), Expect = 0.17
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +2

Query: 137 IMADSLQVPHTDWQEASTGVSRREILLLAAKSLAGSYK 250
           ++A  LQV   +WQ+  +GV+R+E L LAA++L   YK
Sbjct: 313 LLAAYLQVCKNNWQQGVSGVARKETLFLAARTLVTLYK 350


>UniRef50_A6DSQ8 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 383

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = -2

Query: 435 GNNVICQLSTVIARNVATLKKSKFHQIYKFDCVCLLLMIRK*HDDIPRPASLGLGSGYR* 256
           GN  + +L  V+   V   ++ KF QI KF  +   ++  K H+  P  A +G G GY  
Sbjct: 136 GNLYLKELDIVVDGKVKRNREDKFRQINKFVEIMGHVLGDKYHE--PVIADMGCGKGYLT 193

Query: 255 SRLYEPASDLAANKRI 208
             LY+  + L+ N ++
Sbjct: 194 FALYDYLNSLSLNPKV 209


>UniRef50_Q6LN61 Cluster: Putative uncharacterized protein VP2297;
           n=1; Photobacterium profundum|Rep: Putative
           uncharacterized protein VP2297 - Photobacterium
           profundum (Photobacterium sp. (strain SS9))
          Length = 229

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 15/49 (30%), Positives = 31/49 (63%)
 Frame = -3

Query: 506 QYQYNYSRSLARNECYIIMSTVRSAITSFVSCQLSSLGMLPPSKSRNSI 360
           +Y+++Y + LA + C+I++ T+   I SF +  L+S  ++P +   NS+
Sbjct: 115 RYKHSYGKWLAAS-CFIMLPTLVGDIASFTNILLNSNNIMPNAADLNSL 162


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,775,603
Number of Sequences: 1657284
Number of extensions: 9128280
Number of successful extensions: 23117
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23099
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)