Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00373
(580 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 23 2.5
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 23 2.5
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 22 3.3
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 22 3.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 7.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.6
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 109 HRLQPHRRIHHGRQP 153
H L+ H R+H G +P
Sbjct: 23 HHLKTHMRLHTGERP 37
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 109 HRLQPHRRIHHGRQP 153
H L+ H R+H G +P
Sbjct: 176 HHLKTHMRLHTGERP 190
Score = 21.8 bits (44), Expect = 4.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 109 HRLQPHRRIHHGRQP 153
H LQ H R H G +P
Sbjct: 148 HVLQNHERTHTGEKP 162
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 115 LQPHRRIHHGRQP 153
+ PH IHHG P
Sbjct: 23 IPPHYNIHHGATP 35
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 562 FIIRNKVVIVIDTIHLTFLNISTI 491
F+++ +V++TI+LTFL + I
Sbjct: 172 FVVQVYPRLVVNTINLTFLTLLMI 195
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 275 SAADTASPVCMSPPVT*PLTKEFP 204
+A T P C SPP P + P
Sbjct: 33 NANSTYPPACYSPPQVAPQYPQHP 56
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,306
Number of Sequences: 336
Number of extensions: 2172
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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