Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00373
(580 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 1.8
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 25 1.8
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 25 1.8
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 1.8
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 2.3
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 2.3
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.5
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 9.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 9.5
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 23 9.5
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 23 9.5
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 23 9.5
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 23 9.5
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQSVCGTCRLSAMMDPT 127
YE + L N I + D PV+A C+S + + + PT
Sbjct: 65 YECPAGLHFNVAIDVCDFPVNAKCESQSPGDQTTTTLRPT 104
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQSVCGTCRLSAMMDPT 127
YE + L N I + D PV+A C+S + + + PT
Sbjct: 65 YECPAGLHFNVAIDVCDFPVNAKCESQSPGDQTTTTLRPT 104
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQSVCGTCRLSAMMDPT 127
YE + L N I + D PV+A C+S + + + PT
Sbjct: 65 YECPAGLHFNVAIDVCDFPVNAKCESQSPGDQTTTTLRPT 104
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.0 bits (52), Expect = 1.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQSVCGTCRLSAMMDPT 127
YE + L N I + D PV+A C+S + + + PT
Sbjct: 65 YECPAGLHFNVAIDVCDFPVNAKCESQSPGDQTTTTLRPT 104
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQSVCGTCRLSAMMDPT 127
YE + L N I + D PV+A C+S + + + PT
Sbjct: 65 YECPAGLHFNIAIDVCDFPVNAKCESQSPGDQTTTTLRPT 104
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQSVCGTCRLSAMMDPT 127
YE + L N I + D PV+A C+S + + + PT
Sbjct: 65 YECPAGLHFNIAIDVCDFPVNAKCESQSPGDQTTTTLRPT 104
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 22.6 bits (46), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 394 ECCHPQKVEIPSNIQIRLRLLTF 326
+CC V+I IQIR R L +
Sbjct: 212 QCCPEPYVDITFTIQIRRRTLYY 234
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 22.6 bits (46), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 394 ECCHPQKVEIPSNIQIRLRLLTF 326
+CC V+I IQIR R L +
Sbjct: 212 QCCPEPYVDITFTIQIRRRTLYY 234
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 22.6 bits (46), Expect = 9.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQ 172
YE + L N I + D PV+A C+
Sbjct: 65 YECPAGLHFNVAIDVCDFPVNAKCE 89
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 22.6 bits (46), Expect = 9.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 246 YEPASDLAANKRISLLDTPVDASCQ 172
YE + L N I + D PV+A C+
Sbjct: 65 YECPAGLHFNVAIDVCDFPVNAKCE 89
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 485 RSLARNECYIIMSTVRSAITSFVS 414
R L N CYI++ST TSFV+
Sbjct: 7 RFLVNNGCYIVLST---EWTSFVN 27
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 485 RSLARNECYIIMSTVRSAITSFVS 414
R L N CYI++ST TSFV+
Sbjct: 7 RFLVNNGCYIVLST---EWTSFVN 27
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 485 RSLARNECYIIMSTVRSAITSFVS 414
R L N CYI++ST TSFV+
Sbjct: 7 RFLVNNGCYIVLST---EWTSFVN 27
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 485 RSLARNECYIIMSTVRSAITSFVS 414
R L N CYI++ST TSFV+
Sbjct: 7 RFLVNNGCYIVLST---EWTSFVN 27
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,746
Number of Sequences: 2352
Number of extensions: 9238
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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