Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00373
(580 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017066-1|AAH17066.1| 444|Homo sapiens proline-rich coiled-coi... 47 4e-05
AL831963-1|CAD38605.1| 445|Homo sapiens hypothetical protein pr... 47 4e-05
AK090486-1|BAC03467.1| 305|Homo sapiens FLJ00410 protein protein. 47 4e-05
AK057437-1|BAB71487.1| 445|Homo sapiens protein ( Homo sapiens ... 47 4e-05
AJ515429-1|CAD56439.1| 445|Homo sapiens hypothetical protein pr... 47 4e-05
AJ515428-1|CAD56438.1| 445|Homo sapiens hypothetical protein pr... 47 4e-05
AJ427339-1|CAD22113.1| 445|Homo sapiens hypothetical protein pr... 47 4e-05
AJ441110-1|CAD29585.2| 462|Homo sapiens hypothetical protein pr... 42 0.001
AJ515158-1|CAD56470.1| 464|Homo sapiens hypothetical protein pr... 38 0.019
AB019591-1|BAA35002.1| 72|Homo sapiens immunoglubulin heavy ch... 31 2.9
>BC017066-1|AAH17066.1| 444|Homo sapiens proline-rich coiled-coil 1
protein.
Length = 444
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 390 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 437
>AL831963-1|CAD38605.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 438
>AK090486-1|BAC03467.1| 305|Homo sapiens FLJ00410 protein protein.
Length = 305
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 251 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 298
>AK057437-1|BAB71487.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ32875 fis, clone TESTI2004031. ).
Length = 445
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 438
>AJ515429-1|CAD56439.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 438
>AJ515428-1|CAD56438.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 438
>AJ427339-1|CAD22113.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSYKR 253
G +TVG ++ SL V TDW A TG+SRR+++ AA+++AG YK+
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIAGMYKQ 438
>AJ441110-1|CAD29585.2| 462|Homo sapiens hypothetical protein
protein.
Length = 462
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSLAGSY 247
G +TVG ++ SL V TDW A TG+SRR+++ AA+++A Y
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAIADDY 436
>AJ515158-1|CAD56470.1| 464|Homo sapiens hypothetical protein
protein.
Length = 464
Score = 38.3 bits (85), Expect = 0.019
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 GYSLTVGSIMADSL-QVPHTDWQEASTGVSRREILLLAAKSL 235
G +TVG ++ SL V TDW A TG+SRR+++ AA+++
Sbjct: 391 GLLVTVGEVLEKSLLNVSRTDWHMAFTGMSRRQMIYSAARAI 432
>AB019591-1|BAA35002.1| 72|Homo sapiens immunoglubulin heavy chain
protein.
Length = 72
Score = 31.1 bits (67), Expect = 2.9
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 500 QYNYSRSLARNECYIIMSTVRSAITSFVSCQLSSLGMLPPSKS 372
++ SR A+N Y+ ++++R+ T+ + C +G PPS S
Sbjct: 26 RFTISRDNAKNTLYLQINSLRAEDTAVIYCARDIIGYYPPSVS 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,942,460
Number of Sequences: 237096
Number of extensions: 1328931
Number of successful extensions: 4515
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4508
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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