Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00373
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    29   4.5  
BT011496-1|AAR99154.1|  470|Drosophila melanogaster GH26928p pro...    28   7.9  
AE014296-2948|AAF49311.2|  374|Drosophila melanogaster CG32183-P...    28   7.9  
AE014296-2947|AAF49308.2|  470|Drosophila melanogaster CG32183-P...    28   7.9  

>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
            protein.
          Length = 2139

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 275  SAADTASPVCMSPPVT*PLTKEFPS*TRRSTP 180
            SA    SP+C SPP+  P  +   + T RSTP
Sbjct: 1911 SAETKISPLCCSPPIKQPTHQRVVTTTWRSTP 1942


>BT011496-1|AAR99154.1|  470|Drosophila melanogaster GH26928p
           protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 124 HRRIHHGRQPTGPAHRLARGVDRR 195
           H+R HH ++   PAHR+ +G + R
Sbjct: 193 HQRYHHHKEHEEPAHRIRKGHECR 216


>AE014296-2948|AAF49311.2|  374|Drosophila melanogaster CG32183-PA,
           isoform A protein.
          Length = 374

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 124 HRRIHHGRQPTGPAHRLARGVDRR 195
           H+R HH ++   PAHR+ +G + R
Sbjct: 193 HQRYHHHKEHEEPAHRIRKGHECR 216


>AE014296-2947|AAF49308.2|  470|Drosophila melanogaster CG32183-PB,
           isoform B protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 124 HRRIHHGRQPTGPAHRLARGVDRR 195
           H+R HH ++   PAHR+ +G + R
Sbjct: 193 HQRYHHHKEHEEPAHRIRKGHECR 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,502,372
Number of Sequences: 53049
Number of extensions: 441182
Number of successful extensions: 1082
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)