Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00372
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   9.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.6  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +1

Query: 115 YSNTSVLLLTSKWWTLTQRWTMMMMS 192
           + +   ++++  W T+ + W+ M MS
Sbjct: 127 FGSIQFIIISKHWVTIMKEWSFMEMS 152


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 100 PMHSGPIPPPGSM 62
           P+ S P PPPGS+
Sbjct: 207 PVPSTPYPPPGSL 219


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 349 QRQGKIYSSVCKHTC 305
           Q  GK+ +S+CK+ C
Sbjct: 516 QTGGKVETSICKNFC 530


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 102 YVRDIFKYIGAPIDFEVVDIDPTMDNDDDVQYAITTI 212
           YV+   +Y   P+ F   D+DP       V YA  TI
Sbjct: 180 YVQAAARYRKEPLAFSPEDLDPFACT--HVIYAFATI 214


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 449 DSTTPFTDSCSNIAYSP 399
           DST+P      N AYSP
Sbjct: 13  DSTSPLLTPPHNPAYSP 29


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -2

Query: 151 TSKSIGAPMYLNMSRTYPMHSGPIPPPGSMVTA*RPPYCALGI 23
           T  +  A ++   + + P+H  P PP  +   A   PY   G+
Sbjct: 142 TDPAFAASIFHAAATSLPLHYPPPPPVYTHHYARYHPYPNFGV 184


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 122 FEYVANVSHALRTDTASREHG 60
           F  VAN+   LR  T  R +G
Sbjct: 200 FVQVANLRRHLRVHTGERPYG 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,237
Number of Sequences: 336
Number of extensions: 2535
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)