Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00371
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81527-9|CAI91172.1|  577|Caenorhabditis elegans Hypothetical pr...    32   0.28 
Z81527-8|CAI91171.1|  537|Caenorhabditis elegans Hypothetical pr...    32   0.28 
Z81527-7|CAI91170.1|  517|Caenorhabditis elegans Hypothetical pr...    32   0.28 
Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical pr...    32   0.28 
Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z81527-9|CAI91172.1|  577|Caenorhabditis elegans Hypothetical
           protein F35E12.7d protein.
          Length = 577

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 171 QTLITQQITENLNLARTNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKIIDH 10
           QTL  + I++  NL    +Y Y+D  NY ++I  T T FN  L+ +   +++  D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162


>Z81527-8|CAI91171.1|  537|Caenorhabditis elegans Hypothetical
           protein F35E12.7c protein.
          Length = 537

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 171 QTLITQQITENLNLARTNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKIIDH 10
           QTL  + I++  NL    +Y Y+D  NY ++I  T T FN  L+ +   +++  D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162


>Z81527-7|CAI91170.1|  517|Caenorhabditis elegans Hypothetical
           protein F35E12.7b protein.
          Length = 517

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 171 QTLITQQITENLNLARTNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKIIDH 10
           QTL  + I++  NL    +Y Y+D  NY ++I  T T FN  L+ +   +++  D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162


>Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical
           protein F35E12.7a protein.
          Length = 739

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 171 QTLITQQITENLNLARTNSY*YVD--NYFKIITFTSTLFNVNLKLEALISIKIIDH 10
           QTL  + I++  NL    +Y Y+D  NY ++I  T T FN  L+ +   +++  D+
Sbjct: 107 QTLPYEVISKTGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADN 162


>Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical
           protein C09G9.4 protein.
          Length = 611

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +2

Query: 146 VIC*VISVCNSFGIVVRRSELS*LAYRVA*R*RSNYVKIRNMKRSSSRDSMPRSKRTRSS 325
           ++C V+S+C + G +V    L   + +V+   +     + N  +SS R   P  K  RS 
Sbjct: 9   IVCLVVSLCFNAGFIV-YFVLKRKSEKVSEYKKVENPDVENFSKSSVRPPPPEPKPQRSP 67

Query: 326 IGRYDDSSD 352
             R  +S D
Sbjct: 68  PDREKESKD 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,509,418
Number of Sequences: 27780
Number of extensions: 168819
Number of successful extensions: 434
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)