Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00370
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56731 Cluster: PREDICTED: similar to CG2910-PB,... 92 1e-17
UniRef50_Q7KMJ6 Cluster: BcDNA.GH11110; n=6; Endopterygota|Rep: ... 81 3e-14
UniRef50_Q16MW3 Cluster: RNA recognition motif protein split end... 58 1e-07
UniRef50_Q4RVU0 Cluster: Chromosome 9 SCAF14991, whole genome sh... 54 2e-06
UniRef50_Q4RXQ4 Cluster: Chromosome 11 SCAF14979, whole genome s... 52 2e-05
UniRef50_Q96T37 Cluster: Putative RNA-binding protein 15; n=32; ... 49 8e-05
UniRef50_Q4T0D2 Cluster: Chromosome undetermined SCAF11227, whol... 48 1e-04
UniRef50_Q8SX83 Cluster: Protein split ends; n=10; Eukaryota|Rep... 41 0.030
UniRef50_UPI0000DB7FFD Cluster: PREDICTED: similar to CG18497-PA... 40 0.052
UniRef50_UPI000069F4A1 Cluster: Putative RNA-binding protein 15B... 40 0.052
UniRef50_A7RG09 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.84
UniRef50_Q5VVE3 Cluster: SMART/HDAC1 associated repressor protei... 35 1.9
UniRef50_Q5VVE2 Cluster: SMART/HDAC1 associated repressor protei... 35 1.9
UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14; Eutheri... 35 1.9
UniRef50_Q4RXM3 Cluster: Chromosome 11 SCAF14979, whole genome s... 33 5.9
UniRef50_O76366 Cluster: Putative uncharacterized protein; n=4; ... 33 7.8
UniRef50_Q5KKR4 Cluster: Expressed protein; n=2; Filobasidiella ... 33 7.8
>UniRef50_UPI0000D56731 Cluster: PREDICTED: similar to CG2910-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG2910-PB, isoform B - Tribolium castaneum
Length = 728
Score = 91.9 bits (218), Expect = 1e-17
Identities = 37/47 (78%), Positives = 45/47 (95%)
Frame = +3
Query: 510 ALHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
ALHPKASDE++KDTLYREYKKYGD SI++SH++DERVAY+CFR+ ED
Sbjct: 103 ALHPKASDEVIKDTLYREYKKYGDLSIRLSHDVDERVAYVCFRNPED 149
Score = 75.8 bits (178), Expect = 8e-13
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 ITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSD---XXXXXXXXXXXXXXXXXXXXYV 426
ITV+I+NMKRSS RD+ PRSKR+RSS+GRYDDSSD YV
Sbjct: 20 ITVRIQNMKRSSDRDTPPRSKRSRSSMGRYDDSSDERLTPERVRRRGSRNRSPSPRPRYV 79
Query: 427 SPHRDDYVRSRDARDESVRSY-YKVLCV 507
SPHRD+Y+R + R+Y YKVLCV
Sbjct: 80 SPHRDEYLRPPE------RAYPYKVLCV 101
>UniRef50_Q7KMJ6 Cluster: BcDNA.GH11110; n=6; Endopterygota|Rep:
BcDNA.GH11110 - Drosophila melanogaster (Fruit fly)
Length = 793
Score = 80.6 bits (190), Expect = 3e-14
Identities = 31/47 (65%), Positives = 43/47 (91%)
Frame = +3
Query: 510 ALHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
AL PKA D+ +++TLYREYKK+GDFS++++H+LDERVAY+CFR+ ED
Sbjct: 105 ALPPKAPDDFIEETLYREYKKFGDFSVRLAHDLDERVAYVCFRTPED 151
Score = 43.6 bits (98), Expect = 0.004
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +1
Query: 256 ITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXXXXXXXXXX 408
IT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 13 ITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPERMRRRLDR 72
Query: 409 XXXXYVSPHRDDYVRSRDARDESVRSYYKVLCV 507
Y SPHR+ Y+R + + YKVLCV
Sbjct: 73 SPSRYGSPHREPYMRGPPPAERP--AGYKVLCV 103
>UniRef50_Q16MW3 Cluster: RNA recognition motif protein split ends;
n=1; Aedes aegypti|Rep: RNA recognition motif protein
split ends - Aedes aegypti (Yellowfever mosquito)
Length = 663
Score = 58.4 bits (135), Expect = 1e-07
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +1
Query: 256 ITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSD----XXXXXXXXXXXXXXXXXXXXY 423
ITVKIRNMKRS+SRDS RSKR R SIGRY+ SSD Y
Sbjct: 12 ITVKIRNMKRSASRDSPARSKR-RGSIGRYEGSSDERVTPDRMRRRVARSPSPRGGSTRY 70
Query: 424 VSPHRDDYVRSRDARDESVRSY-YK 495
SPHR++Y SR R+ Y YK
Sbjct: 71 ASPHREEY--SRGGRESGSERYSYK 93
>UniRef50_Q4RVU0 Cluster: Chromosome 9 SCAF14991, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 841
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
L + SDE V+D L+ E+KK+GD S+KIS DER+A++ FR ED
Sbjct: 129 LGTQLSDEEVEDGLFHEFKKFGDVSVKISRSNDERIAFVNFRKPED 174
>UniRef50_Q4RXQ4 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 11 SCAF14979, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 804
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
L + +DE V+D L+ E+K++GD SIKI E DERVA++ FR +D
Sbjct: 122 LGSQLNDEEVEDGLFHEFKRFGDVSIKIGRENDERVAFVNFRRPDD 167
>UniRef50_Q96T37 Cluster: Putative RNA-binding protein 15; n=32;
Amniota|Rep: Putative RNA-binding protein 15 - Homo
sapiens (Human)
Length = 977
Score = 49.2 bits (112), Expect = 8e-05
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFSIKISH-----ELDERVAYICFRSAED 650
L + SDE V+D L+ E+K++GD S+KISH DERVA++ FR ED
Sbjct: 177 LGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPED 227
>UniRef50_Q4T0D2 Cluster: Chromosome undetermined SCAF11227, whole
genome shotgun sequence; n=5; Tetraodontidae|Rep:
Chromosome undetermined SCAF11227, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 602
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFSIKISHELD-ERVAYICFRSAED 650
L + SDE V+D L E+KK+GD S+K+SH + R+AY+ FR ED
Sbjct: 23 LGSQVSDEDVEDALIHEFKKFGDVSVKLSHTPELGRIAYVNFRHPED 69
>UniRef50_Q8SX83 Cluster: Protein split ends; n=10; Eukaryota|Rep:
Protein split ends - Drosophila melanogaster (Fruit fly)
Length = 5560
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 561 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 607
>UniRef50_UPI0000DB7FFD Cluster: PREDICTED: similar to CG18497-PA,
isoform A, partial; n=1; Apis mellifera|Rep: PREDICTED:
similar to CG18497-PA, isoform A, partial - Apis
mellifera
Length = 4346
Score = 39.9 bits (89), Expect = 0.052
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ +R A +CF+ ED
Sbjct: 317 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGAAGDRYALVCFKKPED 363
>UniRef50_UPI000069F4A1 Cluster: Putative RNA-binding protein 15B
(RNA-binding motif protein 15B).; n=1; Xenopus
tropicalis|Rep: Putative RNA-binding protein 15B
(RNA-binding motif protein 15B). - Xenopus tropicalis
Length = 661
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +3
Query: 531 DEIVKDTLYREYKKYGDFSIKISHELD-ERVAYICFR 638
D +++D L+R ++++GD S+K+SH + RVAYI FR
Sbjct: 15 DPLLEDWLFRHFQRFGDISVKLSHTPELGRVAYINFR 51
>UniRef50_A7RG09 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 599
Score = 35.9 bits (79), Expect = 0.84
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +3
Query: 540 VKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
+K++++ E+KK+GD S+ + ++R A + FRS +D
Sbjct: 1 MKESIFHEFKKFGDISVHLFGRGNDRYAVLYFRSLDD 37
>UniRef50_Q5VVE3 Cluster: SMART/HDAC1 associated repressor protein;
n=5; Euteleostomi|Rep: SMART/HDAC1 associated repressor
protein - Homo sapiens (Human)
Length = 373
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 522 KASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRSAED 650
+++D +KD L+ E+KK+G S++I +ER + FR ED
Sbjct: 304 RSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQED 347
>UniRef50_Q5VVE2 Cluster: SMART/HDAC1 associated repressor protein;
n=5; Euteleostomi|Rep: SMART/HDAC1 associated repressor
protein - Homo sapiens (Human)
Length = 296
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 522 KASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRSAED 650
+++D +KD L+ E+KK+G S++I +ER + FR ED
Sbjct: 84 RSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQED 127
>UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14;
Eutheria|Rep: Msx2-interacting protein - Homo sapiens
(Human)
Length = 3664
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 522 KASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRSAED 650
+++D +KD L+ E+KK+G S++I +ER + FR ED
Sbjct: 345 RSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQED 388
>UniRef50_Q4RXM3 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 3147
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 522 KASDEIVKDTLYREYKKYGDF-SIKISHELDERVAYICFRSAED 650
+++D +KD L+ E+KK+G S++I ++R + FR ED
Sbjct: 341 RSTDTSLKDGLFHEFKKHGKVTSVQIHGASEDRYGLVFFRQQED 384
>UniRef50_O76366 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 520
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 534 EIVKDTLYREYKKYGDFSIKI--SHELDERVAYICF 635
E +K L +E KKY F IK+ + E DER+AY+ F
Sbjct: 48 EQIKQYLTQELKKYAPFEIKVVKNPEEDERLAYVNF 83
>UniRef50_Q5KKR4 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 503
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 472 HLEHHENARNHRDEVTHIDRAG*GSVLDVVLVPGFHARQSYR 347
H HH +H D++ H R+ GSV V G + Q+YR
Sbjct: 191 HHHHHRRHHDHDDDLDHKQRSRAGSVSSVPDTEGLNESQAYR 232
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,327,548
Number of Sequences: 1657284
Number of extensions: 9444656
Number of successful extensions: 23821
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23816
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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