Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00370
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
 Frame = -1

Query: 340 YQYCCVSVLIAAYYHATNFA-----SYCEFS 263
           Y YC + +L+  YY    F       YC FS
Sbjct: 287 YFYCALIILLCIYYFCRAFIIFPTHFYCAFS 317


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 605 LMGYFYTKVTILLIFSIQSI 546
           L+G+ +  VT  +I SIQ I
Sbjct: 367 LLGFIFGSVTSYIIISIQFI 386


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 274 NMKRSSSRDSMPRSK 318
           N +R+SSR  +PR+K
Sbjct: 232 NSRRASSRGLIPRAK 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,189
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)