Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00370
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 81 2e-15
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 81 2e-15
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 81 2e-15
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 41 0.002
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 41 0.002
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 41 0.002
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 41 0.002
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 41 0.002
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 41 0.002
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 41 0.002
BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p pro... 33 0.34
AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA... 32 0.78
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 80.6 bits (190), Expect = 2e-15
Identities = 31/47 (65%), Positives = 43/47 (91%)
Frame = +3
Query: 510 ALHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
AL PKA D+ +++TLYREYKK+GDFS++++H+LDERVAY+CFR+ ED
Sbjct: 105 ALPPKAPDDFIEETLYREYKKFGDFSVRLAHDLDERVAYVCFRTPED 151
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +1
Query: 256 ITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXXXXXXXXXX 408
IT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 13 ITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPERMRRRLDR 72
Query: 409 XXXXYVSPHRDDYVRSRDARDESVRSYYKVLCV 507
Y SPHR+ Y+R + + YKVLCV
Sbjct: 73 SPSRYGSPHREPYMRGPPPAERP--AGYKVLCV 103
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 80.6 bits (190), Expect = 2e-15
Identities = 31/47 (65%), Positives = 43/47 (91%)
Frame = +3
Query: 510 ALHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
AL PKA D+ +++TLYREYKK+GDFS++++H+LDERVAY+CFR+ ED
Sbjct: 105 ALPPKAPDDFIEETLYREYKKFGDFSVRLAHDLDERVAYVCFRTPED 151
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +1
Query: 256 ITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXXXXXXXXXX 408
IT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 13 ITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPERMRRRLDR 72
Query: 409 XXXXYVSPHRDDYVRSRDARDESVRSYYKVLCV 507
Y SPHR+ Y+R + + YKVLCV
Sbjct: 73 SPSRYGSPHREPYMRGPPPAERP--AGYKVLCV 103
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 80.6 bits (190), Expect = 2e-15
Identities = 31/47 (65%), Positives = 43/47 (91%)
Frame = +3
Query: 510 ALHPKASDEIVKDTLYREYKKYGDFSIKISHELDERVAYICFRSAED 650
AL PKA D+ +++TLYREYKK+GDFS++++H+LDERVAY+CFR+ ED
Sbjct: 105 ALPPKAPDDFIEETLYREYKKFGDFSVRLAHDLDERVAYVCFRTPED 151
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +1
Query: 256 ITVKIRNMKRSSSRDSMPRSK----RTRSSIGR-YDDSS----DXXXXXXXXXXXXXXXX 408
IT+KI NMKRS+SR P S+ R S+GR YD+ S D
Sbjct: 13 ITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPERMRRRLDR 72
Query: 409 XXXXYVSPHRDDYVRSRDARDESVRSYYKVLCV 507
Y SPHR+ Y+R + + YKVLCV
Sbjct: 73 SPSRYGSPHREPYMRGPPPAERP--AGYKVLCV 103
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 77 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 123
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 555 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 601
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 561 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 607
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 504 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 550
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 504 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 550
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 561 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 607
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LHPKASDEIVKDTLYREYKKYGDFS-IKISHELDERVAYICFRSAED 650
L ++SD +KD L+ EYKK+G + +K+ + ER A +CF+ +D
Sbjct: 561 LPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDD 607
>BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p
protein.
Length = 328
Score = 33.1 bits (72), Expect = 0.34
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 271 RNMKRSSSRDSMPRSKRTRSSIGRYDDSS 357
R+++RS +D++PR +RTRSS R SS
Sbjct: 77 RSLRRSREKDAVPRRRRTRSSPSRSSSSS 105
>AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA
protein.
Length = 463
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 271 RNMKRSSSRDSMPRSKRTRSSIGRYDDSS 357
R+ +RS +D++PR +RTRSS R SS
Sbjct: 59 RSSRRSREKDAVPRRRRTRSSPSRSSSSS 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,613,427
Number of Sequences: 53049
Number of extensions: 441125
Number of successful extensions: 1226
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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