Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00370
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.48
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 25 0.63
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 2.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 2.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 2.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 2.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.6
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 5.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.9
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 5.9
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 647 LCTSEADVGYSLIQLMGYFYTKVTILLIF 561
+C D GY + +G FY + ++L F
Sbjct: 238 ICELTNDAGYVVYSALGSFYIPMLVMLFF 266
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 25.0 bits (52), Expect = 0.63
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 487 SCGQIHLEHHENA--RNHRDEVTHIDRAG*GSVLDVVLVPGFHARQSYRHTYQYCCVSVL 314
S I LEH E R H V +I A S+ VV+ H R+ + H CV +
Sbjct: 258 SLTNIQLEHFEMKIKRKHNVFVNNILAASACSLF-VVIFHFAHPREEFNHWTVMRCVQAM 316
Query: 313 IA 308
IA
Sbjct: 317 IA 318
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S + ER
Sbjct: 287 REYRKYGETSKERSRDRTER 306
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 54 REYRKYGETSKERSRNRTER 73
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 54 REYRKYGETSKERSRNRTER 73
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 54 REYRKYGETSKERSRNRTER 73
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 54 REYRKYGETSKERSRNRTER 73
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 287 REYRKYGETSKERSRNRTER 306
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 287 REYRKYGETSKERSRNRTER 306
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 287 REYRKYGETSKERSRNRTER 306
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 287 REYRKYGETSKERSRNRTER 306
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 287 REYRKYGETSKERSRNRTER 306
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG+ S + S ER
Sbjct: 276 REYRKYGETSKERSRNRTER 295
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 463 HHENARNHRDEVT 425
HH+NAR H VT
Sbjct: 121 HHDNARPHTSLVT 133
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 558 REYKKYGDFSIKISHELDER 617
REY+KYG S + S + ER
Sbjct: 276 REYRKYGKTSKERSRDRMER 295
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 463 HHENARNHRDEVT 425
HH+NAR H VT
Sbjct: 243 HHDNARPHTSLVT 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,114
Number of Sequences: 438
Number of extensions: 3034
Number of successful extensions: 30
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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