Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00369
(789 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 26 0.39
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.8
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 2.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 8.5
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 8.5
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 25.8 bits (54), Expect = 0.39
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +1
Query: 679 DDEDSFKR---QFSKYIKLGVTADA 744
+D+D +K+ QFSK IKLG+ D+
Sbjct: 418 EDKDGYKKFYEQFSKNIKLGIHEDS 442
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 501 LLVSCLWSYEGCC*RWPQCSSFHQKIPWL*CRIQ 602
LL+ WS W CSSF Q+ C I+
Sbjct: 397 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPIK 430
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +3
Query: 90 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 233
+ +FK + +A+K +VV+DK K + + + + + D C +
Sbjct: 198 KTRFKTINNILENLWAKKLIVVKDKKKSRSDEQTIDICMRCHDQLCDM 245
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 371 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGTFNPRVGHLACYIFVG--ETH 198
+A + IAD L ML L + + H++++R+ + HL G E+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESA 1190
Query: 197 NQT 189
N+T
Sbjct: 1191 NET 1193
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 371 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGTFNPRVGHLACYIFVG--ETH 198
+A + IAD L ML L + + H++++R+ + HL G E+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESA 1190
Query: 197 NQT 189
N+T
Sbjct: 1191 NET 1193
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 371 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGTFNPRVGHLACYIFVG--ETH 198
+A + IAD L ML L + + H++++R+ + HL G E+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESA 1190
Query: 197 NQT 189
N+T
Sbjct: 1191 NET 1193
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 371 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGTFNPRVGHLACYIFVG--ETH 198
+A + IAD L ML L + + H++++R+ + HL G E+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESA 1190
Query: 197 NQT 189
N+T
Sbjct: 1191 NET 1193
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -2
Query: 554 LRPPSTAPFIAPKTRDQ 504
L PP++ P ++PK+ +
Sbjct: 106 LTPPNSEPLVSPKSEKE 122
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 371 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 273
E + +L ++ LNM Q + SH ++ VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,760
Number of Sequences: 336
Number of extensions: 4192
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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