Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00368
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.9  
AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4 p...    22   5.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 588 IFALLISKASWYAFCESSTTECLVSPVPLLQGTCSNL 478
           +FAL+     +Y F  S  +  L S VPL+     +L
Sbjct: 165 LFALITGNVLFYPFLPSDVSYNLFSFVPLVVNALDHL 201


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 588 IFALLISKASWYAFCESSTTECLVSPVPLLQGTCSNL 478
           +FAL+     +Y F  S  +  L S VPL+     +L
Sbjct: 121 LFALITGNVLFYPFLPSDVSYNLFSFVPLVVNALDHL 157


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 590 QPTHPIRLGLALNFS 634
           +P HP+R+   ++FS
Sbjct: 375 EPVHPVRVNTIISFS 389


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 590 QPTHPIRLGLALNFS 634
           +P HP+R+   ++FS
Sbjct: 375 EPVHPVRVNTIISFS 389


>AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4
           protein.
          Length = 23

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 177 GGRDEGSDGNRRR 215
           GGR E S G RRR
Sbjct: 9   GGRPETSSGRRRR 21


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 600 CVGCIFALLISKAS 559
           C+G  FALL+SK +
Sbjct: 437 CIGQRFALLVSKVA 450


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 272 PTVIMACHFLN 304
           P VI+ACH L+
Sbjct: 169 PNVILACHMLS 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,880
Number of Sequences: 336
Number of extensions: 3510
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)