Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00367
(282 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 0.54
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 0.54
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 0.54
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 0.54
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 0.94
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 3.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 5.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 5.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 6.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 19 8.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 19 8.8
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 0.54
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 95 SPSQIRTRISVMPILLQQAWLNPQVRFEH 181
SP + + V LLQQ W +P++R+ +
Sbjct: 99 SPDESSLKYEV-EFLLQQQWYDPRLRYSN 126
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 0.54
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 95 SPSQIRTRISVMPILLQQAWLNPQVRFEH 181
SP + + V LLQQ W +P++R+ +
Sbjct: 99 SPDESSLKYEV-EFLLQQQWYDPRLRYSN 126
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 0.54
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 95 SPSQIRTRISVMPILLQQAWLNPQVRFEH 181
SP + + V LLQQ W +P++R+ +
Sbjct: 150 SPDESSLKYEV-EFLLQQQWYDPRLRYSN 177
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 0.54
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 95 SPSQIRTRISVMPILLQQAWLNPQVRFEH 181
SP + + V LLQQ W +P++R+ +
Sbjct: 99 SPDESSLKYEV-EFLLQQQWYDPRLRYSN 126
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.6 bits (46), Expect = 0.94
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -1
Query: 276 FLLKSKIFIPTP--FSPAS*ILCHEHT 202
FL ++KIF PTP F+ + L EHT
Sbjct: 294 FLSEAKIFPPTPGSFNFSMAALATEHT 320
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 20.6 bits (41), Expect = 3.8
Identities = 11/47 (23%), Positives = 18/47 (38%)
Frame = +1
Query: 7 EHLEGVSNLLLVSEKQFNFLKWATQIFGILTLADTDKDLGHADPAPT 147
EH + N V E N L W Q +++ + G+ + T
Sbjct: 95 EHFTALGNFYFVHESLKNVLLWDFQECTFISVNGKEVHSGNIEAVTT 141
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 5.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 80 KYLVFSPSQIRTRISVMPILLQQAWLNPQ 166
KYL+F+ + I V ++L + +PQ
Sbjct: 309 KYLIFAMILVSISICVTVVVLNVHFRSPQ 337
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 5.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 80 KYLVFSPSQIRTRISVMPILLQQAWLNPQ 166
KYL+F+ + I V ++L + +PQ
Sbjct: 309 KYLIFAMILVSISICVTVVVLNVHFRSPQ 337
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 6.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 174 LNICRQCFREYAHDIGFKKL 233
LN+ Q Y+H + FK L
Sbjct: 453 LNLAAQKREYYSHYVAFKSL 472
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 19.4 bits (38), Expect = 8.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 137 LLQQAWLNPQ 166
LLQ WL+P+
Sbjct: 339 LLQNTWLDPE 348
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 19.4 bits (38), Expect = 8.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 282 FFFLLKSKIFIPTPFS 235
FF ++K+ IFI F+
Sbjct: 95 FFMMIKTPIFIYNSFN 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,572
Number of Sequences: 438
Number of extensions: 1559
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5494764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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