Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00366
(425 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 61 8e-09
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 59 4e-08
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 56 3e-07
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 56 4e-07
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 54 2e-06
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 52 5e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 51 9e-06
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 51 1e-05
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 50 2e-05
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 46 4e-04
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 44 0.001
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 44 0.001
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 41 0.009
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 41 0.012
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 39 0.050
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 39 0.050
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 37 0.15
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 36 0.46
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 35 0.61
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 35 0.61
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 33 2.5
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 32 4.3
UniRef50_A6LIK0 Cluster: Putative teichoic acid biosynthesis pro... 32 5.7
UniRef50_Q4P1G3 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 32 5.7
UniRef50_Q6U8A8 Cluster: Serine protease-like protein precursor;... 31 7.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 61.3 bits (142), Expect = 8e-09
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLF---LYQXXXXXXXXXXXARP*MMRF*RS 330
GK + KEW+PVTKLGRLV++ KI LE IYLF + + + +++
Sbjct: 53 GKAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKI-MP 111
Query: 331 CLYRTNTCWTAHLSSIFAIGDNNGHIGLGVK 423
+T + AIGD NGH+GLGVK
Sbjct: 112 VQKQTRAGQRTRFKAFVAIGDYNGHVGLGVK 142
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/54 (55%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK-HVLDSTPFKHF 380
K + E L SLPIKE EII F G SL DEVLKIMPVQ + T FK F
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAF 127
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 58.8 bits (136), Expect = 4e-08
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +1
Query: 157 AGKEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQXXXXXXXXXXXAR--P*MMRF*RS 330
A ++++KEWVPVTKLGRLV+ GKI +E IYL+ R +M+
Sbjct: 26 AKRDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFLPRLNDEVMKV-VP 84
Query: 331 CLYRTNTCWTAHLSSIFAIGDNNGHIGLGVK 423
+T + IGD++GH+GLG+K
Sbjct: 85 VQKQTRAGQRTRFKAFVVIGDSDGHVGLGIK 115
Score = 44.8 bits (101), Expect = 8e-04
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK-HVLDSTPFKHF 380
K + E L SLPIKE++I+ F P LNDEV+K++PVQ + T FK F
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAF 100
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 56.0 bits (129), Expect = 3e-07
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLF---LYQXXXXXXXXXXXARP*MMRF*RS 330
GK + KEW+PVTKLGRLV++ KI LE IYLF + + + +++
Sbjct: 28 GKAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKI-MP 86
Query: 331 CLYRTNTCWTAHLSSIFAIGDNNGHIGL 414
+T + AIGD NGH+GL
Sbjct: 87 VQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/54 (55%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK-HVLDSTPFKHF 380
K + E L SLPIKE EII F G SL DEVLKIMPVQ + T FK F
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAF 102
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 55.6 bits (128), Expect = 4e-07
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQXXXXXXXXXXXARP*MMRF*RSCLY 339
G +D+ WVP TKLGRLV++GKI LE I+LF + C
Sbjct: 43 GGDDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPV 102
Query: 340 RTNTC--WTAHLSSIFAIGDNNGHIGLGVK 423
+ T + +GD NGHIGLGVK
Sbjct: 103 QKQTTAGQRMRFKAFVVVGDCNGHIGLGVK 132
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 240 EHL-LVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK 347
EH+ L SLPIKE +I+ F G L DEV+KI PVQ +
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQ 105
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 53.6 bits (123), Expect = 2e-06
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 169 DQKEWVPVTKLGRLVREGKIDKLESIYLFLY--QXXXXXXXXXXXARP*MMRF*RSCLYR 342
++K WVPVTKLGRLV+ GKI +E I+L + + +M + +
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLLPGLQDEVMNI-KPVQKQ 89
Query: 343 TNTCWTAHLSSIFAIGDNNGHIGLGVK 423
T ++ +GD+NGH+GLG+K
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIK 116
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 52.0 bits (119), Expect = 5e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
GK + KEW+PVTKLGRLV++ KI LE IYLF
Sbjct: 53 GKAEDKEWIPVTKLGRLVKDMKIKSLEEIYLF 84
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/42 (61%), Positives = 28/42 (66%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK 347
K + E L SLPIKE EII F G SL DEVLKIMPVQ +
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQ 115
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 51.2 bits (117), Expect = 9e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
GK + KEW+PVTKLGRLV++ KI LE IYLF
Sbjct: 53 GKAEDKEWMPVTKLGRLVKDMKIKSLEEIYLF 84
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 50.8 bits (116), Expect = 1e-05
Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK-HVLDSTPFKHFCHWRQQ 398
K + E L SLPIKE EII F G SL DEVLKIMPV+ + T FK F R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 399 RSY 407
Y
Sbjct: 62 NGY 64
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/54 (55%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNKHVL-DSTPFKHF 380
K + E L SLPIKE EII F G SL DEVLKIMPVQ + T FK F
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAF 67
Score = 44.0 bits (99), Expect = 0.001
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +1
Query: 184 VPVTKLGRLVREGKIDKLESIYLFLYQXXXXXXXXXXXARP*MMRF*RSCLYRTNTCWTA 363
+PVTKLG L+ + KI LE IYLF + + TC
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 364 H--LSSIFAIGDNNGHIGLGVK 423
H + IGD NGH+GL VK
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVK 82
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 45.6 bits (103), Expect = 4e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
K + KEW+P TKLG LV++ KI LE IYLF
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLF 84
Score = 42.7 bits (96), Expect = 0.003
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = +3
Query: 222 KNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQNK 347
K + E L SLPIK EII F G SL +EVLK MPVQ +
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQ 115
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 172 QKEWVPVTKLGRLVREGKIDKLESIYLF 255
++EWVP+TKLGRLV+ GKI LE+I+ F
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQF 88
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +1
Query: 163 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF---LYQXXXXXXXXXXXARP*MMRF*RSC 333
++++ EW+P T +GRLV+ KI LE I+ F + + + ++ +S
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSI-KSV 73
Query: 334 LYRTNTCWTAHLSSIFAIGDNNGHIGLGVK 423
+T + ++ +GD GH+G+G K
Sbjct: 74 QKQTRAGQKTRIKAVVVVGDRKGHVGIGTK 103
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 41.1 bits (92), Expect = 0.009
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLF 255
G+ED+ W+P+TKLG LV+E KI LE IY F
Sbjct: 49 GREDK--WLPITKLGCLVKEMKIKSLEEIYFF 78
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 40.7 bits (91), Expect = 0.012
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 240 EHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQ 341
E L SLPIKE EII F G +L DEVLK +P Q
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQ 101
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 38.7 bits (86), Expect = 0.050
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 162 QGRPERVGSCXQTRPSCSRRKNRQTREHLLVSLPIKEFEIIXXFXGPSLNDEVLKIMPVQ 341
QG + P K + + +L SLPIKEFE+ G L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLF-SLPIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 342 NK 347
+
Sbjct: 175 KQ 176
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 38.7 bits (86), Expect = 0.050
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1
Query: 181 WVPVTKLGRLVREGKIDKLESIYLF 255
W PVTKLGRLV++GK+ ++ I+ F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEF 59
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 37.1 bits (82), Expect = 0.15
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 175 KEWVPVTKLGRLVREGKIDKLESI 246
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 35.5 bits (78), Expect = 0.46
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +3
Query: 258 LPIKEFEIIXXFXGPSLNDEVLKIMPVQNKHVLDSTPFKHF 380
LP+KEFEI F SL D+VLKI+P+ T F F
Sbjct: 18 LPVKEFEINDFFLEASLKDKVLKIIPLSRFRNDQWTRFNSF 58
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 35.1 bits (77), Expect = 0.61
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 160 GKEDQKEWVPVTKLGRLVREGKI 228
G + KEW+PVT LGRLV++ KI
Sbjct: 40 GAPEDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 35.1 bits (77), Expect = 0.61
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 187 PVTKLGRLVREGKIDKLESIYLFLYQXXXXXXXXXXXAR-P*MMRF*RSCLYRTNTCWTA 363
PVTKLGRLV++GK+ ++ I+ F + +R + +T+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLSRLKEEVMTIDQVQKQTSRGKEP 95
Query: 364 HLSSIFAIGDNNGHIGL 414
L + AIGD+NGH L
Sbjct: 96 RLKASVAIGDHNGHRAL 112
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 178 EWVPVTKLGRLVREGKIDKLESIYLFLYQ 264
EW P TKLG +V+EG+I + I+ YQ
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQ 43
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 32.3 bits (70), Expect = 4.3
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = +3
Query: 255 SLPIKEFEIIXXFXGPSLNDEVLKIMPVQNKHVLDSTPFKHFCHWRQQRSY 407
SL K+ II F SL DE IMPVQ + L S PFK F R S+
Sbjct: 84 SLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRPFKDFVSIRDYSSH 131
>UniRef50_A6LIK0 Cluster: Putative teichoic acid biosynthesis
protein F; n=1; Parabacteroides distasonis ATCC
8503|Rep: Putative teichoic acid biosynthesis protein F
- Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC11152)
Length = 413
Score = 31.9 bits (69), Expect = 5.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 343 FCTGMIFRTSSFRDGPXXKXMISNSLIGKETSKCSRVCRFFLREQDGRVWXQEPTL 176
F +G +F + + G K M+ N + + S SRVC ++ EQ G + PT+
Sbjct: 121 FTSGRVFNVNLWH-GISLKAMVDNKAVPADRSFLSRVCMPYVYEQYGLFFSTTPTI 175
>UniRef50_Q4P1G3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 841
Score = 31.9 bits (69), Expect = 5.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 239 SSLSIFPSRTRRPSLVTGTHSFWSSLPAHDHGXDHDRVHEDRRGLYLHRVIR 84
S +S FPS T S V T S W+SL + H ++ED L+ + R
Sbjct: 331 SEVSDFPSTTSLTSTVARTRSRWNSLLSDSLTISHQGINEDDLTLFYSSLYR 382
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 31.9 bits (69), Expect = 5.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 175 KEWVPVTKLGRLVREGKIDKLESIY 249
+EW P T +G LV+EGKI ++ ++
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELF 35
>UniRef50_Q6U8A8 Cluster: Serine protease-like protein precursor;
n=1; Ornithodoros moubata|Rep: Serine protease-like
protein precursor - Ornithodoros moubata (Soft tick)
Length = 301
Score = 31.5 bits (68), Expect = 7.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 242 LSSLSIFPSRTRRPSLVTGT---HSFWSSLPAHDHGXDHDRVHE 120
+S + + R PS V GT HS + +HDH DHD H+
Sbjct: 145 ISPICLPKKNQRLPSTVYGTGWGHSHADHVHSHDHDHDHDHSHD 188
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,080,853
Number of Sequences: 1657284
Number of extensions: 5880587
Number of successful extensions: 17613
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 16752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17542
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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