Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00364
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.44 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.59 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.59 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.1  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   5.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 8   SGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 109
           + +VT+W + E+I++     +L V     PV+LT
Sbjct: 156 ANVVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 324 QTQDGVGECVSFVDGHGVGDTVAESSTIPVVRPDAYS 214
           Q+ D +G C S  D H   +  AES    +  P A S
Sbjct: 652 QSDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALS 688


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 324 QTQDGVGECVSFVDGHGVGDTVAESSTIPVVRPDAYS 214
           Q+ D +G C S  D H   +  AES    +  P A S
Sbjct: 544 QSDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALS 580


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = -3

Query: 517 GSSKTSRGSCWMQRWPFPARSQERRSTASP*CHERFP 407
           G+S ++R S W   W      Q +       C + FP
Sbjct: 352 GNSASNRHSAWQSHWLNKGAEQAKNVLKCVWCKQSFP 388


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 130 GQQREDDPDHVRNIQHARHVRRHPSRA 210
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 536 SDDLTVGKFEDFSRELLDAAVAI 468
           S+D+  G  E+FSRE ++ A AI
Sbjct: 101 SNDIA-GSIEEFSRERVEDAYAI 122


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 536 SDDLTVGKFEDFSRELLDAAVAI 468
           S+D+  G  E+FSRE ++ A AI
Sbjct: 334 SNDIA-GSIEEFSRERVEDAYAI 355


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 536 SDDLTVGKFEDFSRELLDAAVAI 468
           S+D+  G  E+FSRE ++ A AI
Sbjct: 334 SNDIA-GSIEEFSRERVEDAYAI 355


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 580 PRSWVWKLAASTRTHITPS*SAN 648
           PRS++  L+ S R+H+    SAN
Sbjct: 196 PRSYIPPLSTSMRSHLCNWGSAN 218


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 580 PRSWVWKLAASTRTHITPS*SAN 648
           PRS++  L+ S R+H+    SAN
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSAN 378


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 580 PRSWVWKLAASTRTHITPS*SAN 648
           PRS++  L+ S R+H+    SAN
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSAN 378


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 273 HRAHLRRIRTPPRHPASGLSRSRP 344
           H+A +R +  PP+       RS P
Sbjct: 62  HKAPIRPVALPPKREIPSPKRSSP 85


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = +1

Query: 199 PSRALAVRVRSYHRYRAGLGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 348
           P+     R   +   RA   D V H   + E    P   L LD   RDL+
Sbjct: 152 PTMEAIARSGIWENCRAAYEDIVKHLERLREERCDPDRPLPLDQKARDLS 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,268
Number of Sequences: 336
Number of extensions: 4162
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)