Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00364
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_56| Best HMM Match : Actin (HMM E-Value=0) 175 2e-44
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 175 2e-44
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 1e-38
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 145 3e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 119 2e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 94 8e-20
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 92 3e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 79 3e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 60 2e-09
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 36 0.041
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 32 0.38
SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.67
SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2) 31 0.67
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 30 1.5
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 30 1.5
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.5
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12) 30 2.0
SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018) 30 2.0
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 2.7
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 29 2.7
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032) 29 2.7
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 2.7
SB_33843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_30560| Best HMM Match : Herpes_UL73 (HMM E-Value=4.5) 29 4.7
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 29 4.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.7
SB_16470| Best HMM Match : EGF (HMM E-Value=1.7e-06) 29 4.7
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 28 6.2
SB_39894| Best HMM Match : Pox_A32 (HMM E-Value=0.59) 28 8.3
SB_21126| Best HMM Match : 7tm_1 (HMM E-Value=0.0015) 28 8.3
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 28 8.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 175 bits (427), Expect = 2e-44
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIV+DS
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDS 156
Score = 157 bits (380), Expect = 1e-38
Identities = 87/147 (59%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 157 GDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
Query: 436 LCYVALDFEQEMATAAXXXXXXXXXNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAAST 615
LCYVALDFEQEM TAA P + + P + A
Sbjct: 217 LCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 276
Query: 616 RTHITPS*SANVDIRKTC-TQHVLSGG 693
T +VDIRK VLSGG
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGG 303
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 175 bits (427), Expect = 2e-44
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 133
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIV+DS
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDS 155
Score = 156 bits (378), Expect = 2e-38
Identities = 88/147 (59%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 156 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 215
Query: 436 LCYVALDFEQEMATAAXXXXXXXXXNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAAST 615
L YVALDFEQEMATAA P + + P + A
Sbjct: 216 LAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 275
Query: 616 RTHITPS*SANVDIRKTC-TQHVLSGG 693
T +VDIRK VLSGG
Sbjct: 276 ETTYNSIMKCDVDIRKDLYANTVLSGG 302
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 175 bits (427), Expect = 2e-44
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 133
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIV+DS
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDS 155
Score = 157 bits (382), Expect = 6e-39
Identities = 88/147 (59%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 156 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 215
Query: 436 LCYVALDFEQEMATAAXXXXXXXXXNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAAST 615
LCYVALDFEQEM TAA P + + P + A
Sbjct: 216 LCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 275
Query: 616 RTHITPS*SANVDIRKTC-TQHVLSGG 693
T +VDIRK VLSGG
Sbjct: 276 ETTYNSIMKCDVDIRKDLYANTVLSGG 302
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 175 bits (427), Expect = 2e-44
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIV+DS
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDS 156
Score = 158 bits (383), Expect = 5e-39
Identities = 88/147 (59%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
Query: 436 LCYVALDFEQEMATAAXXXXXXXXXNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAAST 615
LCYVALDFEQEM TAA P + + P + A
Sbjct: 217 LCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 276
Query: 616 RTHITPS*SANVDIRKTC-TQHVLSGG 693
T +VDIRK VLSGG
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGG 303
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 175 bits (427), Expect = 2e-44
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIV+DS
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDS 156
Score = 99 bits (238), Expect = 2e-21
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHE TYNSIMKC+ DLYA ++
Sbjct: 214 YELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVM 273
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/48 (79%), Positives = 40/48 (83%)
Frame = +1
Query: 340 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 483
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAA 205
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/17 (82%), Positives = 15/17 (88%), Gaps = 2/17 (11%)
Frame = +1
Query: 256 GDGVSHTVPIYE--GYA 300
GDGVSHTVPIYE GY+
Sbjct: 157 GDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 157 bits (380), Expect = 1e-38
Identities = 87/147 (59%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 119 GDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 178
Query: 436 LCYVALDFEQEMATAAXXXXXXXXXNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAAST 615
LCYVALDFEQEM TAA P + + P + A
Sbjct: 179 LCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIH 238
Query: 616 RTHITPS*SANVDIRKTC-TQHVLSGG 693
T +VDIRK VLSGG
Sbjct: 239 ETTYNSIMKCDVDIRKDLYANTVLSGG 265
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 134 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 256
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 118
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTF 61
GIVTNWDDMEKI TF
Sbjct: 74 GIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 145 bits (352), Expect = 3e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTAEREIVRDIKEK
Sbjct: 35 GDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEK 94
Query: 436 LCYVALDFEQEM 471
LCYVALDF QE+
Sbjct: 95 LCYVALDFYQEI 106
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 155 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 256
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDS 34
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 119 bits (287), Expect = 2e-27
Identities = 50/75 (66%), Positives = 65/75 (86%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE
Sbjct: 2201 GDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKET 2260
Query: 436 LCYVALDFEQEMATA 480
LCY A+D+E+E+ A
Sbjct: 2261 LCYCAMDYERELKEA 2275
Score = 108 bits (260), Expect = 4e-24
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = +2
Query: 41 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 220
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 221 ASGRTTGIVLD 253
ASGRTTG V D
Sbjct: 2189 ASGRTTGTVFD 2199
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCE 647
+ LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KC+
Sbjct: 2285 YMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCD 2331
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 103 bits (248), Expect = 1e-22
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +2
Query: 8 SGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 184
+GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE +
Sbjct: 76 NGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEG 135
Query: 185 MYVAIQAVLSLYASGRTTGIVLDSATVSPTPCP 283
+Y+AIQAVL+LYA G TG+V+DS CP
Sbjct: 136 VYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICP 168
Score = 99 bits (238), Expect = 2e-21
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEK
Sbjct: 160 GDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEK 219
Query: 436 LCYVALDFEQEMATA 480
LCYV + EQE A
Sbjct: 220 LCYVGYNIEQEQKLA 234
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 501 EVFELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCE 647
E + LPDG+V+ + ERF PEALFQP + +E G+ E +N+I +
Sbjct: 242 EQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAAD 290
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/56 (69%), Positives = 51/56 (91%)
Frame = +2
Query: 89 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 256
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDA 181
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 182 GDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +3
Query: 501 EVFELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATR 680
+ +ELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKC+ DLY+
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNC 71
Query: 681 IV 686
++
Sbjct: 72 VL 73
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/91 (35%), Positives = 57/91 (62%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N PA +
Sbjct: 7 GMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNVPAFF 66
Query: 191 VAIQAVLSLYASGRTTGIVLDSATVSPTPCP 283
+ +VL+ +A+GR+ G+V+DS + P
Sbjct: 67 LCKNSVLTAFANGRSNGLVIDSGATQTSAVP 97
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 277 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 375
VP+++GY L AI+R LAG +T ++ E
Sbjct: 96 VPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E + IKE+
Sbjct: 69 GDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMETAKTIKER 128
Query: 436 LCYVALDFEQEMA 474
Y+ D +E A
Sbjct: 129 WGYICPDIAKEFA 141
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIKE 432
G + IYEG+ L H + L++ G LT+ L + L + RG++FT+++ +IV DIKE
Sbjct: 786 GFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIKE 845
Query: 433 KLCYVALDFEQEM 471
K+CY++ D +E+
Sbjct: 846 KICYLSKDHLKEV 858
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFL 590
+ LPDGQ+I+IG E E LF+P L
Sbjct: 871 YTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 44 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 223
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 224 SGRTTGIVLDSAT 262
+GIV T
Sbjct: 572 YSAVSGIVEQRVT 584
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 14 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
IV +WD ME+ W + LR PE+H LL
Sbjct: 306 IVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 174 TRPPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRTP 305
TR T +PCS TR V+P + W R LP R + ++ P
Sbjct: 1531 TRLLATKDFQPCSAKTRRVIPSFTVWRVRGRLPLRFWINIVKNP 1574
>SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 434 SCATSLLTSSRKWPPL---HPAAPSRSLRTSRRSGHHYRKR 547
SC ++L SR W +PAAP+RS+ + RR+G ++
Sbjct: 262 SCTSTLSNHSRAWSEKDTGNPAAPARSMTSPRRNGRRKTRK 302
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 131 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 247
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2)
Length = 466
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 434 SCATSLLTSSRKWPPL---HPAAPSRSLRTSRRSGHHYRKR 547
SC ++L SR W +PAAP+RS+ + RR+G ++
Sbjct: 376 SCTSTLSNHSRAWSEKDTGNPAAPARSMTSPRRNGRRKTRK 416
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 167 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPCPSTKDTHSPTPS 316
T TP++ + QA S+ S T V S V+P+ ST+ S TPS
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPS 1889
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +2
Query: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPCPS 286
T+ + ++ + T + T P++ + Q S+ +S + T V S +P+ PS
Sbjct: 1870 TQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVTPS 1929
Query: 287 TKDTHSPTPS 316
T T S TPS
Sbjct: 1930 TLMTPSVTPS 1939
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 115 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 207
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +3
Query: 183 PCTSPS-KPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRTPPR-HPASGLSRSRPHRLP 356
P T P+ P T P P T PHR H+ RTP R H + PH P
Sbjct: 131 PHTDPTWTPHRPNTDPTRTPHGPHTDPTWTPHRPHMDPTRTPHRPHMDPTRTSHGPHTDP 190
Query: 357 HEDPH 371
+PH
Sbjct: 191 TRNPH 195
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +2
Query: 194 AIQAVLSLYASGRTTGIVLDSATVSPTPCPSTKDTHSPTP 313
AIQ V A RTTGI LD + TK H+PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELDGRRIR-VDYSVTKRAHTPTP 247
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 195 PSKPCSRCTRPVVPP 239
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 561 PEALFQPSFLGMEACGIHE 617
PE +FQPS LG+E GI E
Sbjct: 3 PEIIFQPSMLGLEQAGITE 21
>SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12)
Length = 185
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 149 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSATVSPTPCPSTKDTHSP 307
T I F+ + P A A L L SG +G L +ATV+P + D +SP
Sbjct: 26 TYIGFDLSDVPVPESAGTATLGLTRSGDVSGESLVTATVTPLTATAGTDYNSP 78
>SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018)
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 231 VPPVSCWTRRRCLPHRAHLRR 293
+P V CWT RR LP R RR
Sbjct: 336 LPAVECWTARRILPERQPERR 356
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 68 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 247
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 641 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 695
Query: 248 LDSATVSPTPCPSTKD 295
L + +V P+P P+T D
Sbjct: 696 LSTTSVGPSPTPTTTD 711
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 479 LHPAAPSRSLRTSRRSGHHYRKRKIPLPRGSLPTLVL 589
L + PS+ LR +R G H +R+ LPR S+ L+L
Sbjct: 872 LRASEPSQDLRDQQRDGQH-NQREFNLPRRSMSGLLL 907
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 479 LHPAAPSRSLRTSRRSGHHYRKRKIPLPRGSLPTLVL 589
L + PS+ LR +R G H +R+ LPR S+ L+L
Sbjct: 1020 LRASEPSQDLRDQQRDGQH-NQREFNLPRRSMSGLLL 1055
>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
Length = 216
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 172 QHARHVRRHPSRALAVRVRSYHRYRAGLGDGVSHTVPIYEG 294
QH RHV S ++ S +Y + D + +P YEG
Sbjct: 25 QHERHVGHGKSEGERAQIDSLQKYVRDIFDHIDQIIPKYEG 65
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 68 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 247
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 590 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 644
Query: 248 LDSATVSPTPCPSTKD 295
L + +V P+P P+T D
Sbjct: 645 LSTTSVGPSPTPTTTD 660
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 68 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 247
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 2896 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 2950
Query: 248 LDSATVSPTPCPSTKD 295
L + +V P+P P+T D
Sbjct: 2951 LSTTSVGPSPTPTTTD 2966
>SB_33843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 327 VQTQDGVGECVSFVDGHGV-GDTVAESSTIPVVRPDAYSESTAWMATYM 184
V + V E V F+D H V G+ + SS +PV P E+T+W+ ++
Sbjct: 7 VDSSHRVDEIV-FMDHHPVTGNVGSMSSNVPVCPPVIRMENTSWLKDFL 54
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +2
Query: 56 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 235
T E VAPE + E ++P+ T + ET TP VA + ++ +
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 236 TGIVLDSATVSPTPCPSTKDTHSP 307
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_30560| Best HMM Match : Herpes_UL73 (HMM E-Value=4.5)
Length = 87
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 191 VAIQAVLSLYASGRTTGIVLDSATVSPTPCPSTKDTHSPTPS 316
+ I + ++ + TT L S ++ P+P PS PTPS
Sbjct: 18 ITIIIITTITITTITTNTTLPSTSLPPSPSPSPSPPSPPTPS 59
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 264 TVAESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 133
T+ + + VV D Y + +ATY+ L VSN++ V+ +L
Sbjct: 20 TLGNAVVVVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 119 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 247
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 529 SSLSETKDSVAQRLSSNPRSWVWK 600
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_16470| Best HMM Match : EGF (HMM E-Value=1.7e-06)
Length = 484
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 207 CSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLL 386
C CT + + W P +AH RTP R+ S ++ RL H H+
Sbjct: 265 CRNCTLALFQKIEQW-HLHSEPRKAH----RTPLRNTGSAMATEGKTRLNHLIKHQKYEE 319
Query: 387 VHYH--RRAGNRS 419
V YH R +G S
Sbjct: 320 VVYHLIRNSGTSS 332
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 529 SSLSETKDSVAQRLSSNPRSWVWKLAASTRTH 624
S+ SE K SV +R + ++W+W+ TH
Sbjct: 724 STRSELKASVVERFNRTLKTWMWRWFTYKETH 755
>SB_39894| Best HMM Match : Pox_A32 (HMM E-Value=0.59)
Length = 565
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Frame = +2
Query: 32 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 211
D +++ T +N P +HP+L PKA +T FE P V + A
Sbjct: 147 DAKEVALATVHNTKYCIPLDHPILSEHGAFYPKALPHPLT---FEITLAPVSDVVVYADT 203
Query: 212 SLYASGRTTGIVLDSATVS------PTPCPSTK 292
+ T + L+ A +S PT C TK
Sbjct: 204 VKTPTYTITNLELEYACISSEYLARPTNCGKTK 236
>SB_21126| Best HMM Match : 7tm_1 (HMM E-Value=0.0015)
Length = 195
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 569 SLWATESFVSDSDDLTVGKFEDFSRELLDAAVAISCSKSRAT*HSFSLMSRTISRSAVV 393
S W S + + + + E+F RE L + + CSK+ + + S SR R A +
Sbjct: 120 SFWICHSNSAINPGIYILLSENFRREFLKTTLGLVCSKAPSLPRTSSSKSRKTGRKATL 178
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 171 STRPPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRT--PPRHPASGLSRSRP 344
+T T+P+K S T+PV+ P + LP + + RT PP P R++P
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTPTT--PAPMTLPPISPIDPPRTQPPPIFPIDP-PRTQP 181
Query: 345 HRLPHEDPHRAR 380
+P DP R +
Sbjct: 182 PPIPPIDPPRTQ 193
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 180 PPCTSPSKPCSRCTRPVVPPVSC 248
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 664 SYGCPRSHFMMELYVFSWMPQASIPKNEGWKRASGQRNLSFPIVMT*PSGSS 509
S+G P+ M + F PQAS P + + + Q+ +FP +T + SS
Sbjct: 2547 SFGIPKRGDMTPQFSFGVKPQASQPASSSFAGFTTQKEETFPSKITFGAHSS 2598
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,114,344
Number of Sequences: 59808
Number of extensions: 603348
Number of successful extensions: 2532
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2505
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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