Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00364
(693 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 176 1e-44
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 176 1e-44
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 176 1e-44
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 174 4e-44
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 174 5e-44
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 174 5e-44
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 174 5e-44
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 173 7e-44
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 173 7e-44
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 159 2e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 154 5e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 154 5e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 113 1e-25
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 92 4e-19
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 85 6e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 70 1e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 6e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 60 2e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 52 4e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 39 0.003
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.003
At4g17410.1 68417.m02607 expressed protein 34 0.078
At1g32190.1 68414.m03959 expressed protein 32 0.41
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.73
At1g76240.1 68414.m08853 expressed protein contains Pfam profile... 29 2.9
At1g75640.1 68414.m08788 leucine-rich repeat family protein / pr... 29 2.9
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 29 3.9
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 29 3.9
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 29 3.9
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 29 3.9
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 28 5.1
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 28 5.1
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 28 5.1
At4g16563.1 68417.m02506 aspartyl protease family protein contai... 28 6.8
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 6.8
At3g28790.1 68416.m03593 expressed protein 28 6.8
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 28 6.8
At3g50740.1 68416.m05552 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.9
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 8.9
At1g20060.1 68414.m02511 kinesin motor protein-related 27 8.9
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (429), Expect = 1e-44
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY
Sbjct: 76 GIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 149 bits (362), Expect = 1e-36
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KEK
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEK 217
Query: 436 LCYVALDFEQEMATA 480
L Y+ALD+EQEM TA
Sbjct: 218 LAYIALDYEQEMETA 232
Score = 93.9 bits (223), Expect = 9e-20
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQPS +GMEA GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (428), Expect = 1e-44
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY
Sbjct: 76 GIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 146 bits (355), Expect = 9e-36
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEK
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEK 217
Query: 436 LCYVALDFEQEMATA 480
L Y+ALDFEQE+ T+
Sbjct: 218 LSYIALDFEQELETS 232
Score = 91.1 bits (216), Expect = 6e-19
Identities = 42/60 (70%), Positives = 46/60 (76%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
FELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKC+ DLY ++
Sbjct: 242 FELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (428), Expect = 1e-44
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY
Sbjct: 76 GIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 145 bits (352), Expect = 2e-35
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEK
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEK 217
Query: 436 LCYVALDFEQEMATA 480
L Y+ALD+EQE+ T+
Sbjct: 218 LSYIALDYEQELETS 232
Score = 91.1 bits (216), Expect = 6e-19
Identities = 42/60 (70%), Positives = 46/60 (76%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
FELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKC+ DLY ++
Sbjct: 242 FELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 174 bits (424), Expect = 4e-44
Identities = 80/82 (97%), Positives = 81/82 (98%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 76 GIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 145 bits (351), Expect = 3e-35
Identities = 69/75 (92%), Positives = 71/75 (94%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKEK
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEK 217
Query: 436 LCYVALDFEQEMATA 480
L YVALD+EQE+ TA
Sbjct: 218 LAYVALDYEQELETA 232
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQPS +GMEA GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 174 bits (423), Expect = 5e-44
Identities = 78/82 (95%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 76 GVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 142 bits (345), Expect = 1e-34
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEK
Sbjct: 158 GDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEK 217
Query: 436 LCYVALDFEQEMATA 480
L +VA+D+EQEM T+
Sbjct: 218 LSFVAVDYEQEMETS 232
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 174 bits (423), Expect = 5e-44
Identities = 78/82 (95%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 76 GVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 142 bits (345), Expect = 1e-34
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEK
Sbjct: 158 GDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEK 217
Query: 436 LCYVALDFEQEMATA 480
L +VA+D+EQEM T+
Sbjct: 218 LSFVAVDYEQEMETS 232
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 174 bits (423), Expect = 5e-44
Identities = 78/82 (95%), Positives = 82/82 (100%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 76 GVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 142 bits (345), Expect = 1e-34
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEK
Sbjct: 158 GDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEK 217
Query: 436 LCYVALDFEQEMATA 480
L +VA+D+EQEM T+
Sbjct: 218 LSFVAVDYEQEMETS 232
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 173 bits (422), Expect = 7e-44
Identities = 79/82 (96%), Positives = 80/82 (97%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 76 GIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 150 bits (364), Expect = 7e-37
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEK 217
Query: 436 LCYVALDFEQEMATA 480
LCY+ALD+EQE+ TA
Sbjct: 218 LCYIALDYEQELETA 232
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG+ERFRCPE L+QPS +GME GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 173 bits (422), Expect = 7e-44
Identities = 79/82 (96%), Positives = 80/82 (97%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 76 GIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMY 135
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
VAIQAVLSLYASGRTTGIVLDS
Sbjct: 136 VAIQAVLSLYASGRTTGIVLDS 157
Score = 150 bits (364), Expect = 7e-37
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEK
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEK 217
Query: 436 LCYVALDFEQEMATA 480
LCY+ALD+EQE+ TA
Sbjct: 218 LCYIALDYEQELETA 232
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG+ERFRCPE L+QPS +GME GIHE TYNSIMKC+ DLY ++
Sbjct: 242 YELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 159 bits (385), Expect = 2e-39
Identities = 69/82 (84%), Positives = 77/82 (93%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY
Sbjct: 77 GVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMY 136
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
+ IQAVLSLY+SGRTTGIVLDS
Sbjct: 137 IGIQAVLSLYSSGRTTGIVLDS 158
Score = 140 bits (339), Expect = 8e-34
Identities = 63/75 (84%), Positives = 71/75 (94%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEK
Sbjct: 159 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEK 218
Query: 436 LCYVALDFEQEMATA 480
LCY+A+D+EQEM A
Sbjct: 219 LCYIAVDYEQEMEKA 233
Score = 88.2 bits (209), Expect = 5e-18
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQ S +GME GIHE TYNSIMKC+ DLY ++
Sbjct: 243 YELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVL 302
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 154 bits (374), Expect = 5e-38
Identities = 68/82 (82%), Positives = 77/82 (93%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETF P+MY
Sbjct: 31 GVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMY 90
Query: 191 VAIQAVLSLYASGRTTGIVLDS 256
+ +QA LSL+ASGRTTG VLDS
Sbjct: 91 IGMQAALSLHASGRTTGTVLDS 112
Score = 114 bits (274), Expect = 6e-26
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+
Sbjct: 113 GDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQ 169
Query: 436 LCYVALDFEQEMATA 480
Y+ALD+EQEM A
Sbjct: 170 FGYIALDYEQEMEKA 184
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLYATRIV 686
+ELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKC+ DLY ++
Sbjct: 194 YELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVL 253
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 154 bits (374), Expect = 5e-38
Identities = 68/81 (83%), Positives = 76/81 (93%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+ PAMY
Sbjct: 65 GIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMY 124
Query: 191 VAIQAVLSLYASGRTTGIVLD 253
V++Q+VL LY+SGRTTG+VLD
Sbjct: 125 VSMQSVLYLYSSGRTTGVVLD 145
Score = 137 bits (332), Expect = 6e-33
Identities = 61/73 (83%), Positives = 70/73 (95%)
Frame = +1
Query: 253 LGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 432
LG+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKE
Sbjct: 146 LGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKE 205
Query: 433 KLCYVALDFEQEM 471
KLCYVALD+EQEM
Sbjct: 206 KLCYVALDYEQEM 218
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = +3
Query: 501 EVFELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCERGHP*DLY 671
+ + LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+KC D+Y
Sbjct: 229 KTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMY 285
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 113 bits (271), Expect = 1e-25
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +2
Query: 8 SGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 187
+GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE +N +
Sbjct: 74 NGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGV 133
Query: 188 YVAIQAVLSLYASGRTTGIVLDS 256
++ IQAVL+LYA G TG+V+DS
Sbjct: 134 FIQIQAVLTLYAQGLLTGLVIDS 156
Score = 91.1 bits (216), Expect = 6e-19
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
GDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKEK
Sbjct: 157 GDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEK 216
Query: 436 LCYVALDFEQE 468
LCY++ D+++E
Sbjct: 217 LCYISYDYKRE 227
Score = 47.6 bits (108), Expect = 8e-06
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 507 FELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKCE 647
+ LPDG+VI +G ERF+ PEALF P + +E G+ + + I + +
Sbjct: 241 YTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMD 287
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE + PA++
Sbjct: 98 GIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALF 157
Query: 191 VAIQAVLSLYASGRTTGIVLD----SATVSP 271
+A VL+ +A+GR T +V+D S T+SP
Sbjct: 158 MAKNPVLTSFATGRATSLVVDCGGGSTTISP 188
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 492 LPREVFELPDGQVITIGNERFRCPEALFQPSFL 590
+P +ELPDGQ + IG +RF+ P+ +F PS +
Sbjct: 286 IPTTSYELPDGQTLEIGADRFKVPDVMFNPSIV 318
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 381
G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 180 GGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FETFN P +Y
Sbjct: 93 GQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLY 152
Query: 191 VAIQAVLSLYASGRT-----TGIVLD 253
+A+ +VL+L A T TG+V+D
Sbjct: 153 IAVNSVLALAAGYTTSKCEMTGVVVD 178
Score = 60.9 bits (141), Expect = 8e-10
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 253 LGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 432
+GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE
Sbjct: 179 VGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKE 238
Query: 433 KLCYVALDFEQE 468
CY D +E
Sbjct: 239 MYCYTCSDIVKE 250
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 187
G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 61 GLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGF 120
Query: 188 YVAIQAVLSLYASGRTTGIVLD 253
Y + QAVLSLYA GR +G +D
Sbjct: 121 YASEQAVLSLYAVGRISGCTVD 142
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 501 EVFELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 617
E LPDGQVI+IG ER+ EALFQPS LG+E GI E
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVE 259
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 6e-10
Identities = 34/108 (31%), Positives = 56/108 (51%)
Frame = +1
Query: 157 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLGDGVSHTVPIYEGYALPHAILRLDLAG 336
H +++ H R P L+ ++ G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 337 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 480
+ T+YL ++++ R S E +V D KEKLC+V+LD +++ A
Sbjct: 187 KAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLA 232
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 190
G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F ++Y
Sbjct: 68 GYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLY 127
Query: 191 VA-IQAVLSLYASGRTTGIVLDSATVS 268
+A Q+++ LY + R +L S
Sbjct: 128 IAHPQSLVHLYEASRQPDSILSKTQCS 154
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 531 ITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMKC 644
I + NERF PE LFQP+ LGM G+ E +I C
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSC 330
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +2
Query: 11 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 145
GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 92 GIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 8 SGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 184
S +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+ PA
Sbjct: 88 SNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYGVPA 147
Query: 185 MYVAIQAVLSLYASGRTTGIVLDSATVSPTPCPSTKDTHS 304
+ + A S Y + GI V CP THS
Sbjct: 148 VAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 531 ITIGNERFRCPEALFQPSFLGMEACGIHENTYNSIMK 641
I IG ERFRCPE LF P+ +G++ G+ E SI +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRR 625
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +1
Query: 256 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 435
G +H++P +G + R ++ G +TDYL ++L+ + ++ E D+K +
Sbjct: 177 GFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLE 236
Query: 436 LCYVALDFEQEM 471
CY+A D+ E+
Sbjct: 237 HCYIAPDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 56 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 205
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 206 VLSLYASGRTTGIVLD 253
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 LGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 429
+G V +PI G + + + LT +L + + E SF + VR +K
Sbjct: 257 IGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT---VRTLK 313
Query: 430 EKLCYVALDFEQEMA 474
EKLCYVALD++ E++
Sbjct: 314 EKLCYVALDYKAELS 328
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 56 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 205
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 206 VLSLYASGRTTGIVLD 253
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 LGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 429
+G V +PI G + + + LT +L + + E SF + VR +K
Sbjct: 257 IGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT---VRTLK 313
Query: 430 EKLCYVALDFEQEMA 474
EKLCYVALD++ E++
Sbjct: 314 EKLCYVALDYKAELS 328
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 534 TIGNERFRCPEALFQPSFLGMEACGIHE 617
T+ ERF+ E LFQP GM A +H+
Sbjct: 344 TLSKERFQTGEILFQPRLAGMRAMSLHQ 371
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 34.3 bits (75), Expect = 0.078
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 189 TSPSKPCSRCTRPVVPPVSC-WTRRR----CLPHRAHLRRIRTPPRHPASGLSRSRPHRL 353
+SP KP SR P PP+S + RRR P R RR +PPR + R R H L
Sbjct: 551 SSPVKPKSRQGPP--PPISSDYDRRRRSDRSSPERQSSRRFTSPPRSSSRKSERDRHHDL 608
Query: 354 PHEDPHR 374
E R
Sbjct: 609 DSEHDRR 615
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 159 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTRRRC 266
C K S C P+ CS C +P P SCW +C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKC 379
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 112 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 240
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g76240.1 68414.m08853 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 308
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 195 PSKPCSRCTRPVVPPVSCWTRRRCLPHRAH 284
P+KPC R + P VS TR LP R+H
Sbjct: 12 PNKPCGRSSPSSKPRVSHHTRSISLPCRSH 41
>At1g75640.1 68414.m08788 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1140
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 489 QLPREVFELPDGQVITIGN 545
QLP E+F LPD QV+ +GN
Sbjct: 521 QLPVELFGLPDLQVVALGN 539
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +3
Query: 165 KHSTRPPCTSP--SKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRTPP--RHPASGLS 332
K++ +P +P ++PC+ C R + + RC P R R I PP R P + S
Sbjct: 63 KYTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPER-QWRGINPPPNYRVPTAASS 121
Query: 333 RSRPHRLPH 359
+ LP+
Sbjct: 122 KQLNQILPN 130
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 180 PPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRT-PPRHPASGLSRSRPHRLP 356
PP PS P + PV+PP+ R HL T PP HP+ R P L
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPI-----------RRHLAFASTKPPFHPSDDYHRFNPSSLS 66
Query: 357 HED 365
+ +
Sbjct: 67 NNN 69
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 180 PPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRT-PPRHPASGLSRSRPHRLP 356
PP PS P + PV+PP+ R HL T PP HP+ R P L
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPI-----------RRHLAFASTKPPFHPSDDYHRFNPSSLS 66
Query: 357 HED 365
+ +
Sbjct: 67 NNN 69
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 180 PPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRT-PPRHPASGLSRSRPHRLP 356
PP PS P + PV+PP+ R HL T PP HP+ R P L
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPI-----------RRHLAFASTKPPFHPSDDYHRFNPSSLS 66
Query: 357 HED 365
+ +
Sbjct: 67 NNN 69
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 222 RPVVPPVSCWTRRRCLPHRAHL-RRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYH 398
R V PP R P R+ RR R+PPR + SRS P R +D +R + Y
Sbjct: 105 RVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRS-PRRRSRDD-YREK---DYR 159
Query: 399 RRAGNRS 419
+R+ +RS
Sbjct: 160 KRSRSRS 166
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 222 RPVVPPVSCWTRRRCLPHRAHL-RRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYH 398
R V PP R P R+ RR R+PPR + SRS P R +D +R + Y
Sbjct: 105 RVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRS-PRRRSRDD-YREK---DYR 159
Query: 399 RRAGNRS 419
+R+ +RS
Sbjct: 160 KRSRSRS 166
>At1g58050.1 68414.m06579 helicase domain-containing protein
contains similarity to SP|P24785 Dosage compensation
regulator (Male-less protein) (No action potential
protein) {Drosophila melanogaster}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 1417
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 611 DAASFHTQERGLEESLWATESFVSDSDDLTVGKFEDFSRELLDAAVAISCS 459
D S T RG+ +L +S V ++DDL V K +R ++++A CS
Sbjct: 524 DNFSLTTTSRGIHSALPMVDSCVKENDDLDVVKSNHRARR--NSSMAAECS 572
>At4g16563.1 68417.m02506 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 499
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 446 SLLTSSRKWPPLHPAAPSRSLRTSRRSGHHYRKRK----IPLPRGSLPTLVLGYGS 601
SL TS PLH S S ++R HH+++++ +P+ GS + L GS
Sbjct: 36 SLSTSKHSSSPLHLLKSSSSRSSARFRRHHHKQQQQQLSLPISSGSDYLISLSVGS 91
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 168 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRTPPRHPASGLSRSRPH 347
+S+ PP SP+ CTRP PP PH + PP P S PH
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPP----------PHSPPPPQFSPPPPEPYYYSSPPPPH 567
Query: 348 RL--PHEDP 368
PH P
Sbjct: 568 SSPPPHSPP 576
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 254 SATVSPTPCPSTKDTHSPTPS 316
S + SPTP PST +PTPS
Sbjct: 274 SPSGSPTPTPSTPTPSTPTPS 294
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 264 TVAESSTIPVVRPDAYSEST 205
T+AE STIP PD EST
Sbjct: 463 TIAEDSTIPSTNPDTVLEST 482
>At3g50740.1 68416.m05552 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 487
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 692 PPDNTCCVQVLRMSTFALHDGVICVLVDAASFHTQERGLEESLWATES 549
P D + C L ++ + DG L + T ERG S WA ++
Sbjct: 307 PVDGSACSAYLSANSGKIRDGTPDYLPEGFVSRTHERGFMVSSWAPQA 354
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 171 STRPPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRRIRTPPRHPASGLSRSRP 344
S R P T+ +P ++ P PP R P A R PP P SRS P
Sbjct: 556 SNRDPLTTLHQPINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIP 613
>At1g20060.1 68414.m02511 kinesin motor protein-related
Length = 951
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 234 PPVSCWTRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLP 356
P S T RR P RA T + P S L+ ++PH +P
Sbjct: 12 PCPSTVTVRRNPPRRARATPFTTTTKPPLSSLACAKPHDVP 52
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +2
Query: 23 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 202
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 203 AVLSLYASGRTTGIVL 250
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,948
Number of Sequences: 28952
Number of extensions: 403194
Number of successful extensions: 1531
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -