Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00363
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-... 141 1e-32
UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4; ... 132 5e-30
UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4; Endopterygot... 106 5e-22
UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular orga... 103 4e-21
UniRef50_P67809 Cluster: Nuclease sensitive element-binding prot... 97 4e-19
UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box prot... 96 8e-19
UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular o... 96 8e-19
UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhanc... 95 2e-18
UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: ... 95 2e-18
UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona intesti... 94 2e-18
UniRef50_O46173 Cluster: Y-box protein; n=5; cellular organisms|... 94 2e-18
UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias... 94 3e-18
UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius auratus... 93 5e-18
UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21; Tetrapod... 92 9e-18
UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular org... 91 3e-17
UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ ce... 89 1e-16
UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box fact... 88 2e-16
UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;... 80 4e-14
UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n... 77 5e-13
UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n... 69 8e-11
UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box ... 60 6e-08
UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia japo... 55 2e-06
UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;... 54 3e-06
UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis el... 54 3e-06
UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep: MG... 44 0.003
UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus laev... 42 0.013
UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep: ... 42 0.017
UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome s... 41 0.030
UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.28
UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona intesti... 38 0.28
UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.65
UniRef50_Q984C4 Cluster: Mll8063 protein; n=2; Proteobacteria|Re... 36 0.86
UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n... 36 1.1
UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q7WEE6 Cluster: Putative exported protein; n=2; Bordete... 35 2.0
UniRef50_UPI00005A5F8A Cluster: PREDICTED: hypothetical protein ... 34 3.5
UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12; Bacteria... 34 3.5
UniRef50_A1ZEU1 Cluster: Putative uncharacterized protein; n=5; ... 34 3.5
UniRef50_UPI0000EB41AD Cluster: chromosome transmission fidelity... 33 4.6
UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein; ... 33 4.6
UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB... 33 4.6
UniRef50_Q8SD68 Cluster: PHIKZ094; n=1; Pseudomonas phage phiKZ|... 33 6.0
UniRef50_Q0UIQ2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_UPI00005A214C Cluster: PREDICTED: similar to adiponutri... 33 8.0
UniRef50_Q4TBD4 Cluster: Chromosome undetermined SCAF7145, whole... 33 8.0
UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2; Acti... 33 8.0
UniRef50_A3ZZH5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_Q688X5 Cluster: WRKY transcription factor; n=2; Oryza s... 33 8.0
>UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box
protein - Bombyx mori (Silk moth)
Length = 272
Score = 141 bits (342), Expect = 1e-32
Identities = 65/67 (97%), Positives = 65/67 (97%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAIARNNPRKAVRSVGDGE VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK RG
Sbjct: 65 VHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
Query: 190 YHRQYFP 210
YHRQYFP
Sbjct: 125 YHRQYFP 131
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 592 PRHPEAVMCGTSF 630
PRHPEAVMCGTSF
Sbjct: 259 PRHPEAVMCGTSF 271
Score = 32.7 bits (71), Expect = 8.0
Identities = 29/112 (25%), Positives = 30/112 (26%)
Frame = +3
Query: 255 GLXRXXXXXNXXXXXXXXXXXXXIVPSQRSXXXXXXXXXXXXXXXXXXXXXXXXXVRPRN 434
GL R N IVPSQRS VRPRN
Sbjct: 147 GLGRRGPPPNQGGAQGDEGQEGGIVPSQRSFFRRNFRGGRRGGGPGPMNRGGFRRVRPRN 206
Query: 435 FXXXXXXXXXXXXXXXXXXXXSATTQTNSRGPSXXXXXXXXXXXXXXPMRAR 590
F SATT +GPS PMRAR
Sbjct: 207 FQPGQGGQNQAQRQNGQDGDASATTSNQQQGPSLKVTNLLVLLLRQLPMRAR 258
>UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Lonomia obliqua (Moth)
Length = 254
Score = 132 bits (320), Expect = 5e-30
Identities = 61/67 (91%), Positives = 63/67 (94%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI RNNPRKAVRSVGDGE VEFAVVAGEKG EAAGVTGPGGEPVKGSPYAADK RG
Sbjct: 56 VHQTAIIRNNPRKAVRSVGDGEVVEFAVVAGEKGCEAAGVTGPGGEPVKGSPYAADKRRG 115
Query: 190 YHRQYFP 210
Y+RQY+P
Sbjct: 116 YYRQYYP 122
>UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4;
Endopterygota|Rep: Y-box protein Ct-p50 - Chironomus
tentans (Midge)
Length = 317
Score = 106 bits (254), Expect = 5e-22
Identities = 50/60 (83%), Positives = 53/60 (88%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQ+AI +NNP+KAVRSVGDGE VEF VVAGEKG EAA VTGP GEPVKGSPYAADK RG
Sbjct: 57 VHQSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKRRG 116
>UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular
organisms|Rep: ENSANGP00000031633 - Anopheles gambiae
str. PEST
Length = 166
Score = 103 bits (247), Expect = 4e-21
Identities = 49/61 (80%), Positives = 53/61 (86%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPVKGS YAA+K RG
Sbjct: 37 VHQSAIARNNPKKAVRSVGDGEQVEFDVVIGEKGNEAANVTGPQGEPVKGSQYAAEKRRG 96
Query: 190 Y 192
+
Sbjct: 97 F 97
>UniRef50_P67809 Cluster: Nuclease sensitive element-binding protein
1; n=65; Coelomata|Rep: Nuclease sensitive
element-binding protein 1 - Homo sapiens (Human)
Length = 324
Score = 96.7 bits (230), Expect = 4e-19
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 86 VHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--RN 143
Query: 190 YHRQY 204
++R+Y
Sbjct: 144 HYRRY 148
>UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box protein
Ct-p40; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to Y-box protein Ct-p40 - Nasonia vitripennis
Length = 335
Score = 95.9 bits (228), Expect = 8e-19
Identities = 49/66 (74%), Positives = 51/66 (77%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
V Q I+ N P KAVRSVGDGE VEF VV GEKG EAA VTGP GE VKGSPYAADK RG
Sbjct: 96 VCQRCISNNLPSKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPDGEAVKGSPYAADKRRG 155
Query: 190 YHRQYF 207
Y RQY+
Sbjct: 156 Y-RQYY 160
>UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular
organisms|Rep: DNA-binding protein A - Homo sapiens
(Human)
Length = 372
Score = 95.9 bits (228), Expect = 8e-19
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+ R
Sbjct: 118 VHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR- 176
Query: 190 YHRQYF 207
Y R Y+
Sbjct: 177 YRRGYY 182
>UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhancer
factor II; n=1; Gallus gallus|Rep: Rous sarcoma virus
transcription enhancer factor II - Gallus gallus
(Chicken)
Length = 298
Score = 94.7 bits (225), Expect = 2e-18
Identities = 47/66 (71%), Positives = 51/66 (77%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK + SVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+ R
Sbjct: 115 VHQTAIKKNNPRKYLASVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR- 173
Query: 190 YHRQYF 207
Y R YF
Sbjct: 174 YRRGYF 179
>UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: DNA
binding protein - Canis familiaris (Dog)
Length = 96
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK +RSVGDGE V+F VV GEKG EAA VTGP G PV+GS YAAD+ R
Sbjct: 20 VHQTAIKKNNPRKYLRSVGDGETVQFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR- 78
Query: 190 YHRQYF 207
Y R Y+
Sbjct: 79 YRRGYY 84
>UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona
intestinalis|Rep: Y-box protein 1/2/3 - Ciona
intestinalis (Transparent sea squirt)
Length = 320
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGF-EAAGVTGPGGEPVKGSPYAADKXR 186
+HQTAI +NNP+K +RSVGDGE VEF VV GEKG EAA VTGP GEPVKGS YAAD+ R
Sbjct: 53 IHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKGLPEAANVTGPNGEPVKGSKYAADRRR 112
Query: 187 GYHRQYFP 210
Y +Y P
Sbjct: 113 -YKPRYKP 119
>UniRef50_O46173 Cluster: Y-box protein; n=5; cellular
organisms|Rep: Y-box protein - Drosophila melanogaster
(Fruit fly)
Length = 359
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQ+AIA NNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADK R
Sbjct: 90 VHQSAIA-NNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRN 148
Query: 190 Y 192
+
Sbjct: 149 F 149
>UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias
latipes|Rep: Cold-shock domain protein - Oryzias latipes
(Medaka fish) (Japanese ricefish)
Length = 366
Score = 93.9 bits (223), Expect = 3e-18
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK +RSVGDGE VEF V+ KG EAA VTGPGG PVKGS YA +K R
Sbjct: 30 VHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYAPNKRR- 88
Query: 190 YHRQYFP 210
+ R++FP
Sbjct: 89 FRRRFFP 95
>UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius
auratus|Rep: Y box protein 2 - Carassius auratus
(Goldfish)
Length = 297
Score = 93.1 bits (221), Expect = 5e-18
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK +RSVGDGE VEF VV KG EAA VTGPGG PVKGS YA +K R
Sbjct: 48 VHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKGSEAANVTGPGGIPVKGSRYAPNKRR- 106
Query: 190 YHRQYFP 210
+ R+++P
Sbjct: 107 FRRRFYP 113
>UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21;
Tetrapoda|Rep: Y-box-binding protein 2 - Homo sapiens
(Human)
Length = 364
Score = 92.3 bits (219), Expect = 9e-18
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++ +
Sbjct: 121 VHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS 180
Query: 190 YHRQYFP 210
R++ P
Sbjct: 181 --RRFIP 185
>UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular
organisms|Rep: Y-box factor homolog - Aplysia
californica (California sea hare)
Length = 253
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G V+GS YAAD+ R
Sbjct: 60 VHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYAADRRRF 119
Query: 190 YHRQYFP 210
++P
Sbjct: 120 RRGGWYP 126
>UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ
cell-specific Y-box-binding protein) (Contrin) (MSY2
homolog).; n=1; Xenopus tropicalis|Rep: Y-box-binding
protein 2 (Germ cell-specific Y-box-binding protein)
(Contrin) (MSY2 homolog). - Xenopus tropicalis
Length = 199
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/64 (68%), Positives = 48/64 (75%)
Frame = +1
Query: 19 TAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRGYHR 198
TAI RNNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PVKGS +A ++ R R
Sbjct: 70 TAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRFAPNRRRFRRR 129
Query: 199 QYFP 210
Y P
Sbjct: 130 FYRP 133
>UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box factor;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Y-Box factor - Strongylocentrotus purpuratus
Length = 326
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/59 (74%), Positives = 45/59 (76%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXR 186
VHQ+AI RNNPRK RSVGDGE VEF VV G KG EAA VTGP G PV GS YAADK R
Sbjct: 51 VHQSAIVRNNPRKYQRSVGDGEVVEFDVVEGTKGNEAARVTGPEGAPVVGSKYAADKRR 109
>UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-1 - Caenorhabditis elegans
Length = 208
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/57 (64%), Positives = 42/57 (73%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 180
VHQTAI NNP K +RS+GD E V F +V G KG EAA VTGP G PV+GS YAAD+
Sbjct: 48 VHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYAADR 104
>UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B3F UniRef100 entry -
Rattus norvegicus
Length = 292
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/63 (58%), Positives = 44/63 (69%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQTA+ +N+PRK +RSVGD E VEF V GEK EAA VTG GG PV+ S Y AD+
Sbjct: 58 VHQTAMKKNDPRKYLRSVGDAETVEFDFVEGEKDVEAASVTGLGGVPVQDSKYTADRNHC 117
Query: 190 YHR 198
H+
Sbjct: 118 KHQ 120
>UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC181B UniRef100 entry -
Rattus norvegicus
Length = 210
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 174
VHQTAI +NNPRK + + GD E VEF V+ GEK EAA + GPGG V+GS YAA
Sbjct: 56 VHQTAIKKNNPRKYLHTTGDRETVEFDVIEGEKDAEAANIIGPGG--VQGSQYAA 108
>UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box
protein - Dugesia japonica (Planarian)
Length = 266
Score = 59.7 bits (138), Expect = 6e-08
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
+HQ+AI ++NP +SVG+GE + F +V G KG EAA V+ G+ VKGS YA RG
Sbjct: 56 IHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGNEAANVSAIDGKCVKGSEYALRYPRG 115
Query: 190 YHR 198
R
Sbjct: 116 RGR 118
>UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia
japonica|Rep: Y-Box factor protein - Dugesia japonica
(Planarian)
Length = 178
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 171
VHQ+AI+R P K +S+G+ E V F VV G KG EA VTGP G+ V GS +A
Sbjct: 30 VHQSAISRCQPGKQ-KSLGEDEDVLFDVVKGSKGNEAMNVTGPNGDAVLGSKFA 82
>UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-4 - Caenorhabditis elegans
Length = 294
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +1
Query: 10 VHQTAIARNNPRKA-VRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 171
VHQTAI +++ K +R++ D E V F +V G KG EAA VTGP GE V+GS +A
Sbjct: 119 VHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSRFA 173
>UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis
elegans|Rep: Y-box protein 2 - Caenorhabditis elegans
Length = 267
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 10 VHQTAIARNNPRKA-VRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPY 168
VHQTAIA++ K +R++GD E V F +V G+ G EAA VTGP G+ V GS Y
Sbjct: 93 VHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRY 146
>UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VH++ I + N +S+GDGE VEF ++A + VTGPG +PVKGSP+ A RG
Sbjct: 61 VHKSCIFKPNRNHFTKSIGDGEIVEFGLIASK-------VTGPGFKPVKGSPFVA--KRG 111
Query: 190 YHR 198
HR
Sbjct: 112 GHR 114
>UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep:
MGC115344 protein - Xenopus laevis (African clawed frog)
Length = 221
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 106 KGFEAAGVTGPGGEPVKGSPYAADKXRGYHRQYF 207
+G EAA VTGP G PV+GS YAAD+ R Y R Y+
Sbjct: 65 QGAEAANVTGPKGAPVQGSRYAADRRR-YRRGYY 97
>UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus
laevis|Rep: LOC100036881 protein - Xenopus laevis
(African clawed frog)
Length = 131
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKG--FEAAGVTGPGGEPVKGSP 165
VHQ+ I + RS+ +GE VEF+V+ E+ +AA VTGP G V+G+P
Sbjct: 31 VHQSTIHADG----FRSLAEGEPVEFSVITDERSGKLKAADVTGPNGAAVRGAP 80
>UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep:
Lin-28 homolog B - Homo sapiens (Human)
Length = 250
Score = 41.5 bits (93), Expect = 0.017
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1
Query: 55 RSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGS 162
RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 75 RSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 206
Score = 40.7 bits (91), Expect = 0.030
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1
Query: 55 RSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGS 162
RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 111 RSLKEGEQVEFTFKKSTKGLESLRVTGPGGGPCAGS 146
>UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 106
Score = 37.5 bits (83), Expect = 0.28
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXR 186
VHQT I+ RSV +GE VE+ V + +A VTGP G VKG+P + R
Sbjct: 32 VHQTGISC----AGFRSVWEGEEVEYDVDDTDFAPKAVNVTGPDGVAVKGAPRRRHRNR 86
>UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 193
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGS 162
VHQ++I + RS+ +G+ V+F +KG EA V GPGGE + G+
Sbjct: 57 VHQSSI----DMEGFRSLQEGDRVKFWYKPSKKGLEAVKVVGPGGEKLVGA 103
>UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 36.3 bits (80), Expect = 0.65
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGS 162
VHQ+AI + RS+ +GE V+ + +KG A VT PGG VKG+
Sbjct: 510 VHQSAIKASG----YRSLEEGEHVQLTISNSDKGKVAICVTSPGGGNVKGA 556
>UniRef50_Q984C4 Cluster: Mll8063 protein; n=2; Proteobacteria|Rep:
Mll8063 protein - Rhizobium loti (Mesorhizobium loti)
Length = 338
Score = 35.9 bits (79), Expect = 0.86
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 473 PKWPGWRCLSYNSNQQQGAKPKSNKPVG 556
PKW G+RCL + S + + KS KP+G
Sbjct: 37 PKWDGFRCLGFKSGKAVDLRAKSGKPLG 64
>UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B82 UniRef100 entry -
Rattus norvegicus
Length = 147
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVE 84
VHQT I +NNP K + SVGDGE VE
Sbjct: 123 VHQTVIKKNNP-KYLHSVGDGETVE 146
>UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 238
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKG-FEAAGVTGPGGEPV 153
VHQ+++ + RS+ DG+ VEF+V +G G +A VT PGG V
Sbjct: 33 VHQSSLKSDG----YRSLNDGDVVEFSVGSGNDGRTKAVNVTAPGGRAV 77
>UniRef50_Q7WEE6 Cluster: Putative exported protein; n=2;
Bordetella|Rep: Putative exported protein - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 325
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 459 FVLPAPPGNCADALGGTLLYSLGQDLPHGVHXENCDGKN 343
+V+PAPPG D + T+ ++G++L V EN G N
Sbjct: 37 YVVPAPPGGLIDTMARTVAETMGRELKQPVVIENKPGGN 75
>UniRef50_UPI00005A5F8A Cluster: PREDICTED: hypothetical protein
XP_862398; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_862398 - Canis familiaris
Length = 478
Score = 33.9 bits (74), Expect = 3.5
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 380 GRSWPNE*RRVPPSASAQFPGGAGRTKSGSAPKWPGWRCLSYNSNQQQGAKPKSNKPV-G 556
GR+ P RR PPSA+A P A R P+ G ++ S G P S +P+ G
Sbjct: 371 GRAGPGRARRGPPSAAATDPCEARRQAPSGPPQAAGSPRETHRSGGGPGPGPASARPIPG 430
Query: 557 TTIETTTNESQGL 595
+ + + + GL
Sbjct: 431 SGLPSGQPDPSGL 443
>UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12;
Bacteria|Rep: Cold shock protein CspA - Pseudomonas
stutzeri (strain A1501)
Length = 136
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 55 RSVGDGEXVEFAVVAGEKGFEAAGVTG 135
RS+ +G+ VEF+V+ G+KG +A V G
Sbjct: 109 RSLAEGQQVEFSVIQGQKGLQAEDVAG 135
>UniRef50_A1ZEU1 Cluster: Putative uncharacterized protein; n=5;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 164
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 388 LAQ*IEEGS--AECVRAISRRGREDKIRLSAKMARMEMPQLQLKPTAG 525
LAQ EG+ A VR +RRGR +R+ + + E+PQ Q P G
Sbjct: 92 LAQLHNEGAKGAATVRTYTRRGRNGSVRVRSHRRQTELPQRQFMPIPG 139
>UniRef50_UPI0000EB41AD Cluster: chromosome transmission fidelity
factor 8 homolog (S. cerevisiae) (CTF8), transcript
variant 1, mRNA; n=1; Canis lupus familiaris|Rep:
chromosome transmission fidelity factor 8 homolog (S.
cerevisiae) (CTF8), transcript variant 1, mRNA - Canis
familiaris
Length = 200
Score = 33.5 bits (73), Expect = 4.6
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 380 GRSWPNE*RRVPPSASAQFPGGAGRTKSGSAPKWPGWRCLSYNSNQQQGAKPKSNKPVGT 559
GR WP R P S A P +G+AP P W S ++ G P S V
Sbjct: 21 GRGWPGAGRPPPASLPAARPPPGPSAPAGAAPPAPLWWPASTPASGNMGTSPSSMARVPG 80
Query: 560 TIETTTNE-SQGLDIQRP 610
I + S+G+ + P
Sbjct: 81 PIGPNSGPGSRGIGLPGP 98
>UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein;
n=5; cellular organisms|Rep: Cold-shock DNA-binding
domain protein - Psychrobacter cryohalolentis (strain
K5)
Length = 71
Score = 33.5 bits (73), Expect = 4.6
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 55 RSVGDGEXVEFAVVAGEKGFEAAGV 129
RS+ DGE VEF+VV G+KG +A V
Sbjct: 42 RSLKDGEKVEFSVVEGDKGLQAEEV 66
>UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB
fold; n=2; Cryptosporidium|Rep: Cold shock RNA binding
domain of the OB fold - Cryptosporidium parvum Iowa II
Length = 135
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 55 RSVGDGEXVEFAVVAGEKGF-EAAGVTGPGGEPVKG 159
RS+ E VE+ + +KG +A V+GP G PVKG
Sbjct: 49 RSLAQDERVEYEIETDDKGRRKAVNVSGPNGAPVKG 84
>UniRef50_Q8SD68 Cluster: PHIKZ094; n=1; Pseudomonas phage
phiKZ|Rep: PHIKZ094 - Pseudomonas phage phiKZ
Length = 505
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 256 D*XVVDPRPTKGVHKEMRVKKEALYHLSAVFSVAIFAVDAVGEVLAQ*IEEGSAECVRAI 435
D ++PRP V K + V KEA+ L +F ++ + +V AQ IE+ +AI
Sbjct: 394 DTITIEPRPPVEVRKTLEVNKEAIRRLGDLFKAEKDVLEQLKKV-AQGIEDMELRRSKAI 452
Query: 436 SRRGRED 456
+ R+D
Sbjct: 453 WKGARDD 459
>UniRef50_Q0UIQ2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 364
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 404 RRVPPSASAQFPGGAGRTKSGSAPKWPGWRCLSYNSNQQQGAKPKSNKPVGTTIETTTNE 583
R P A Q PGG + +S S P G + + +QQQ K S+ P+ +I T+
Sbjct: 74 RSYQPGAQGQAPGGMAQQQSPSMPLSDGQ---ANDHHQQQQHKSDSDVPIDPSIAAATSP 130
Query: 584 SQGLDIQRPLCVAHHFM 634
+ Q HH M
Sbjct: 131 TYSHQQQYSPYTPHHDM 147
>UniRef50_UPI00005A214C Cluster: PREDICTED: similar to adiponutrin;
n=1; Canis lupus familiaris|Rep: PREDICTED: similar to
adiponutrin - Canis familiaris
Length = 451
Score = 32.7 bits (71), Expect = 8.0
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +2
Query: 350 PSQFSXWTPWGRSWPNE*RRVPPSASAQFPGGAGRTKSGSAPKWPGW------RCLS 502
PS S WTP GR P E RR P A+A + G + S S + G+ RCLS
Sbjct: 82 PSSPSLWTPHGRPSPREPRRGPRRAAAMYDPERGWSLSFSGCGFLGFYHVGVTRCLS 138
>UniRef50_Q4TBD4 Cluster: Chromosome undetermined SCAF7145, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7145, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1065
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 332 ISAQFFPSQFSXWTPWGRSWPNE*RRVPPSASAQFPGGAGRTKSGSAPKWP 484
I++ PS +S W+ W +WP R P +A+A +G +SG+AP WP
Sbjct: 794 ITSSGCPS-WSVWSRWSAAWP----RWPLAAAA-----SGSRRSGTAPSWP 834
>UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2;
Actinomycetales|Rep: Putative DNA-binding protein -
Streptomyces coelicolor
Length = 162
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 40 PRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGE 147
P ++VRS G VEF V +GE+G +A+G+ P GE
Sbjct: 57 PEESVRS---GLVVEFEVESGERGLKASGIRLPEGE 89
>UniRef50_A3ZZH5 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 707
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 497 LSYNSNQQQGAKPKSNKPVGTTIETTTNES-QGLDIQRPL 613
+ Y++N+ + + K+N+ + T I N S +G+DI RPL
Sbjct: 489 IPYSANEARNLRKKANEGIETVIAAIPNSSSEGMDIDRPL 528
>UniRef50_Q688X5 Cluster: WRKY transcription factor; n=2; Oryza
sativa|Rep: WRKY transcription factor - Oryza sativa
subsp. japonica (Rice)
Length = 419
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = -2
Query: 540 LLGLAPCCWFEL*LRHLHPGHFGAEPDFVLPAPPGNCADALGGTLL 403
LLG A L++ HPGHF A LP P DALGG LL
Sbjct: 269 LLGAAAAAHHHGGLQYHHPGHFAAAVGHRLPPQP---HDALGGGLL 311
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,797,351
Number of Sequences: 1657284
Number of extensions: 10850398
Number of successful extensions: 37786
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 35926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37760
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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