Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00363
(658 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 100 2e-21
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 100 2e-21
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 94 1e-19
BT014638-1|AAT27262.1| 433|Drosophila melanogaster RH44447p pro... 30 2.4
AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p pro... 30 2.4
AY070492-1|AAL47963.1| 121|Drosophila melanogaster GH01562p pro... 30 2.4
AE014297-1396|AAS65140.1| 121|Drosophila melanogaster CG6959-PB... 30 2.4
AE014297-1395|AAF54710.1| 425|Drosophila melanogaster CG6959-PA... 30 2.4
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA... 30 2.4
BT029040-1|ABJ16973.1| 460|Drosophila melanogaster IP03738p pro... 29 5.6
AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p pro... 28 9.7
AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA... 28 9.7
AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA... 28 9.7
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 100 bits (240), Expect = 2e-21
Identities = 47/61 (77%), Positives = 52/61 (85%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADK R
Sbjct: 89 VHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRN 148
Query: 190 Y 192
+
Sbjct: 149 F 149
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 100 bits (240), Expect = 2e-21
Identities = 47/61 (77%), Positives = 52/61 (85%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADK R
Sbjct: 89 VHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRN 148
Query: 190 Y 192
+
Sbjct: 149 F 149
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 94.3 bits (224), Expect = 1e-19
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +1
Query: 10 VHQTAIARNNPRKAVRSVGDGEXVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKXRG 189
VHQ+AIA NNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADK R
Sbjct: 90 VHQSAIA-NNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRN 148
Query: 190 Y 192
+
Sbjct: 149 F 149
>BT014638-1|AAT27262.1| 433|Drosophila melanogaster RH44447p
protein.
Length = 433
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 483 GHFGAEPDFVLPAPPGNCADAL-GGTLLYSLGQDLPH 376
GH AEP +L G CADA+ + + +D PH
Sbjct: 319 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPH 355
>AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p
protein.
Length = 701
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 443 GAGRTKSGSAPKWPGWRCLSYNSNQ---QQGAKPKSNKPVGTTIETTTNESQGLDIQR 607
G G SG WR + Y Q ++G KP+ P+ T++ T+N I+R
Sbjct: 517 GEGNDGSGDEENEHLWRKIRYEREQLLLEKGLKPEVASPLSTSVINTSNNGNSPAIRR 574
>AY070492-1|AAL47963.1| 121|Drosophila melanogaster GH01562p
protein.
Length = 121
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 483 GHFGAEPDFVLPAPPGNCADAL-GGTLLYSLGQDLPH 376
GH AEP +L G CADA+ + + +D PH
Sbjct: 7 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPH 43
>AE014297-1396|AAS65140.1| 121|Drosophila melanogaster CG6959-PB,
isoform B protein.
Length = 121
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 483 GHFGAEPDFVLPAPPGNCADAL-GGTLLYSLGQDLPH 376
GH AEP +L G CADA+ + + +D PH
Sbjct: 7 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPH 43
>AE014297-1395|AAF54710.1| 425|Drosophila melanogaster CG6959-PA,
isoform A protein.
Length = 425
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 483 GHFGAEPDFVLPAPPGNCADAL-GGTLLYSLGQDLPH 376
GH AEP +L G CADA+ + + +D PH
Sbjct: 311 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPH 347
>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
protein.
Length = 1465
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 443 GAGRTKSGSAPKWPGWRCLSYNSNQ---QQGAKPKSNKPVGTTIETTTNESQGLDIQR 607
G G SG WR + Y Q ++G KP+ P+ T++ T+N I+R
Sbjct: 1281 GEGNDGSGDEENEHLWRKIRYEREQLLLEKGLKPEVASPLSTSVINTSNNGNSPAIRR 1338
>BT029040-1|ABJ16973.1| 460|Drosophila melanogaster IP03738p
protein.
Length = 460
Score = 29.1 bits (62), Expect = 5.6
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 25 IARNNPRKAVRSVGDGEXVEFAVVAGE-KGFEAAGVTGPGGEPVKGSPYAAD 177
+AR P DG V AV+A + G AG T G PV G+ AAD
Sbjct: 202 VARAVPATDGNGAPDGVPVAGAVLATDGNGAPVAGATDGNGAPVAGAVPAAD 253
>AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p
protein.
Length = 1838
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 497 LSYNSNQQQGAKPK-SNKPVGTTIETTTNESQGLDIQRPLCVA 622
++YN G+ P + P GT ++ SQGL+IQ+PL VA
Sbjct: 855 MAYNYGYPSGSVPPLAYAPPGTV--PASSASQGLNIQQPLYVA 895
>AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA
protein.
Length = 1833
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 497 LSYNSNQQQGAKPK-SNKPVGTTIETTTNESQGLDIQRPLCVA 622
++YN G+ P + P GT ++ SQGL+IQ+PL VA
Sbjct: 855 MAYNYGYPSGSVPPLAYAPPGTV--PASSASQGLNIQQPLYVA 895
>AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA
protein.
Length = 1263
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 425 SAQFPGGAGRTKSGSAPKWPGWRCLSYNSNQQQGAKPKSNKPVGTTIETTTNE 583
+A P G+ ++ +APK + S +KPKS KP I+ +E
Sbjct: 390 AATVPSGSPKSPESAAPKAEPRKKKSMRQGVVNPSKPKSKKPASKAIKQPKDE 442
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,049,601
Number of Sequences: 53049
Number of extensions: 535756
Number of successful extensions: 1999
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1998
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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