Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00362
(668 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ305404-1|ABD58936.1| 594|Drosophila melanogaster wntless isof... 115 7e-26
AY060600-1|AAL28148.1| 594|Drosophila melanogaster GH01813p pro... 115 7e-26
AE014296-1921|AAF50085.2| 594|Drosophila melanogaster CG6210-PA... 115 7e-26
AE014296-1920|AAN11905.1| 562|Drosophila melanogaster CG6210-PB... 115 7e-26
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 28 10.0
>DQ305404-1|ABD58936.1| 594|Drosophila melanogaster wntless isoform
A protein.
Length = 594
Score = 115 bits (276), Expect = 7e-26
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Frame = +1
Query: 244 IGTSAEGQWKWDENIELEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPAV----EDTS 411
+G AEGQW W++N+ ++ TSAF TGVYGMWNIYIFALL+LYAPSHKQWP + E T
Sbjct: 494 MGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDETTQ 553
Query: 412 DTQNL-----SEEIEFT--PLQERSSEISSLTSFLKK 501
+N+ SEEIEF+ P SEISSLTSF +K
Sbjct: 554 SNENIVASAASEEIEFSHLPSDSNPSEISSLTSFTRK 590
Score = 85.0 bits (201), Expect(2) = 9e-19
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2
Query: 8 IGTNLALTFIILAGISTGIYFLFLCYMIWQVFINISHKRQSLPTMCSVRRLHYE 169
+G +A+TFI+LAG+S IYFLFLCYMIW+VF NI KR SLP+M RRLHYE
Sbjct: 383 LGAKVAMTFIVLAGVSAAIYFLFLCYMIWKVFRNIGDKRTSLPSMSQARRLHYE 436
Score = 27.1 bits (57), Expect(2) = 9e-19
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 167 EGIIYRFKFXXXXXXXXXXXXIIGFTLGQV 256
+G+IYRFKF + GF +GQ+
Sbjct: 468 KGLIYRFKFLMLATLVCAALTVAGFIMGQM 497
>AY060600-1|AAL28148.1| 594|Drosophila melanogaster GH01813p
protein.
Length = 594
Score = 115 bits (276), Expect = 7e-26
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Frame = +1
Query: 244 IGTSAEGQWKWDENIELEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPAV----EDTS 411
+G AEGQW W++N+ ++ TSAF TGVYGMWNIYIFALL+LYAPSHKQWP + E T
Sbjct: 494 MGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDETTQ 553
Query: 412 DTQNL-----SEEIEFT--PLQERSSEISSLTSFLKK 501
+N+ SEEIEF+ P SEISSLTSF +K
Sbjct: 554 SNENIVASAASEEIEFSHLPSDSNPSEISSLTSFTRK 590
Score = 85.0 bits (201), Expect(2) = 9e-19
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2
Query: 8 IGTNLALTFIILAGISTGIYFLFLCYMIWQVFINISHKRQSLPTMCSVRRLHYE 169
+G +A+TFI+LAG+S IYFLFLCYMIW+VF NI KR SLP+M RRLHYE
Sbjct: 383 LGAKVAMTFIVLAGVSAAIYFLFLCYMIWKVFRNIGDKRTSLPSMSQARRLHYE 436
Score = 27.1 bits (57), Expect(2) = 9e-19
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 167 EGIIYRFKFXXXXXXXXXXXXIIGFTLGQV 256
+G+IYRFKF + GF +GQ+
Sbjct: 468 KGLIYRFKFLMLATLVCAALTVAGFIMGQM 497
>AE014296-1921|AAF50085.2| 594|Drosophila melanogaster CG6210-PA,
isoform A protein.
Length = 594
Score = 115 bits (276), Expect = 7e-26
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Frame = +1
Query: 244 IGTSAEGQWKWDENIELEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPAV----EDTS 411
+G AEGQW W++N+ ++ TSAF TGVYGMWNIYIFALL+LYAPSHKQWP + E T
Sbjct: 494 MGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDETTQ 553
Query: 412 DTQNL-----SEEIEFT--PLQERSSEISSLTSFLKK 501
+N+ SEEIEF+ P SEISSLTSF +K
Sbjct: 554 SNENIVASAASEEIEFSHLPSDSNPSEISSLTSFTRK 590
Score = 85.0 bits (201), Expect(2) = 9e-19
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2
Query: 8 IGTNLALTFIILAGISTGIYFLFLCYMIWQVFINISHKRQSLPTMCSVRRLHYE 169
+G +A+TFI+LAG+S IYFLFLCYMIW+VF NI KR SLP+M RRLHYE
Sbjct: 383 LGAKVAMTFIVLAGVSAAIYFLFLCYMIWKVFRNIGDKRTSLPSMSQARRLHYE 436
Score = 27.1 bits (57), Expect(2) = 9e-19
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 167 EGIIYRFKFXXXXXXXXXXXXIIGFTLGQV 256
+G+IYRFKF + GF +GQ+
Sbjct: 468 KGLIYRFKFLMLATLVCAALTVAGFIMGQM 497
>AE014296-1920|AAN11905.1| 562|Drosophila melanogaster CG6210-PB,
isoform B protein.
Length = 562
Score = 115 bits (276), Expect = 7e-26
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Frame = +1
Query: 244 IGTSAEGQWKWDENIELEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPAV----EDTS 411
+G AEGQW W++N+ ++ TSAF TGVYGMWNIYIFALL+LYAPSHKQWP + E T
Sbjct: 462 MGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDETTQ 521
Query: 412 DTQNL-----SEEIEFT--PLQERSSEISSLTSFLKK 501
+N+ SEEIEF+ P SEISSLTSF +K
Sbjct: 522 SNENIVASAASEEIEFSHLPSDSNPSEISSLTSFTRK 558
Score = 107 bits (257), Expect = 1e-23
Identities = 47/83 (56%), Positives = 58/83 (69%)
Frame = +2
Query: 8 IGTNLALTFIILAGISTGIYFLFLCYMIWQVFINISHKRQSLPTMCSVRRLHYEGIIYRF 187
+G +A+TFI+LAG+S IYFLFLCYMIW+VF NI KR SLP+M RRLHYEG+IYRF
Sbjct: 383 LGAKVAMTFIVLAGVSAAIYFLFLCYMIWKVFRNIGDKRTSLPSMSQARRLHYEGLIYRF 442
Query: 188 KFXXXXXXXXXXXXIIGFTLGQV 256
KF + GF +GQ+
Sbjct: 443 KFLMLATLVCAALTVAGFIMGQM 465
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 115 SQAAVFTNHVLCEAFAL*RHYISFQISDAGYIAVCCTDYNRIY 243
+Q A +NH +A +H+ S +S ++++ TD+ R +
Sbjct: 547 NQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAF 589
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,966,316
Number of Sequences: 53049
Number of extensions: 566959
Number of successful extensions: 1193
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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