Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00358
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      35   8e-04
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      35   8e-04
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    29   0.039
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.64 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 284 YHRDVPGLTERFEVYVAKKEICNAYTELNDPATQRERFEEQAKNRAAGDDETPPTDEA 457
           YH   PG   R  + +++K+ C  Y E  D     +  +      + GD  TPP D+A
Sbjct: 617 YHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGSCGSMGDAHTPPEDDA 674


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 284 YHRDVPGLTERFEVYVAKKEICNAYTELNDPATQRERFEEQAKNRAAGDDETPPTDEA 457
           YH   PG   R  + +++K+ C  Y E  D     +  +      + GD  TPP D+A
Sbjct: 509 YHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGSCGSMGDAHTPPEDDA 566


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 703 IAGC*FITKTFFLNSKLVSSVRTDVCTPTSLLLYGFC 593
           +A   + + TFF  S+L++ + T +    S LL GFC
Sbjct: 47  VAALVYCSVTFFALSELLTDLATSILLKVSSLLIGFC 83


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 56  CHHRYSSKGWCEIDFYS 6
           CH  +SS  WC    YS
Sbjct: 138 CHQGFSSSTWCNYSAYS 154


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 361 GVGITDFFLSNINFKPLCKSW 299
           GV +T++  S+ + KP+ K W
Sbjct: 569 GVALTNWHPSDKSAKPMLKPW 589


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 259 RISNINVGFIHSSSRN 212
           +ISN+N   IHS+  N
Sbjct: 190 KISNLNTSLIHSTHLN 205


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 648 APFELMFVHPHLF 610
           +P +  FVHPH F
Sbjct: 93  SPIDEKFVHPHRF 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,691
Number of Sequences: 336
Number of extensions: 4692
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)