Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00355
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       24   1.4  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   2.5  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   4.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   4.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   4.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   4.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.9  

>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 354 ICVSYVYDAPSTQPDPD 404
           + +SY+Y AP  +P P+
Sbjct: 14  VYISYIYAAPEPEPAPE 30


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 363 SYVYDAPSTQPDPDAAKP--AHNPHDRDGAPPTPP 461
           S++  AP   P+   A    A +P + DG  P PP
Sbjct: 101 SHIPTAPPIPPEIQRALEWNAAHPEEDDGGQPRPP 135


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 397 IQMRPNQRTILTTVT 441
           I +RP   TILTTV+
Sbjct: 114 IDVRPQNETILTTVS 128


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 397 IQMRPNQRTILTTVT 441
           I +RP   TILTTV+
Sbjct: 162 IDVRPQNETILTTVS 176


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 397 IQMRPNQRTILTTVT 441
           I +RP   TILTTV+
Sbjct: 162 IDVRPQNETILTTVS 176


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 397 IQMRPNQRTILTTVT 441
           I +RP   TILTTV+
Sbjct: 162 IDVRPQNETILTTVS 176


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 260  YDGLDEAVRLSGAWPAHDSRGTRTDPFHH 174
            +DG D  +RL   W A  +   R +P +H
Sbjct: 1454 FDGKDYPLRLGPCWHAVMTTYPRINPDNH 1482


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = +3

Query: 348 DGICVSYVYDAPSTQPDPDAAKPAHNPHDRDGAPPT 455
           DGI   YV       PD           D+ G PPT
Sbjct: 112 DGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPT 147


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
 Frame = +3

Query: 384 STQPDPDAAKPAHNPHD-----RDGAPPTP 458
           S QP   A  P  +PH      + G+PP P
Sbjct: 13  SQQPSSGAPGPQPSPHQSPQAPQRGSPPNP 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,301
Number of Sequences: 438
Number of extensions: 3756
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)