Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00352
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19865| Best HMM Match : cNMP_binding (HMM E-Value=8.3e-39) 83 2e-16
SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_12691| Best HMM Match : cNMP_binding (HMM E-Value=1.7e-26) 50 3e-06
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_59756| Best HMM Match : cNMP_binding (HMM E-Value=5.7e-21) 41 0.001
SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26) 41 0.001
SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_43598| Best HMM Match : cNMP_binding (HMM E-Value=4.3e-22) 40 0.002
SB_33011| Best HMM Match : cNMP_binding (HMM E-Value=0.037) 39 0.005
SB_18428| Best HMM Match : cNMP_binding (HMM E-Value=0.037) 39 0.005
SB_56249| Best HMM Match : cNMP_binding (HMM E-Value=5.4e-23) 35 0.064
SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_16528| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_19072| Best HMM Match : RIIa (HMM E-Value=3.5e-07) 33 0.34
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_48433| Best HMM Match : Ion_trans (HMM E-Value=6.1e-26) 32 0.45
SB_50313| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_11282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_21541| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25) 31 1.4
SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 2.3
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 30 2.4
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_49169| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 3.2
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 29 4.2
SB_47365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_44854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 29 5.6
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 29 5.6
SB_55670| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-29) 29 5.6
SB_49167| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 7.4
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_29710| Best HMM Match : LHC (HMM E-Value=3.3) 28 7.4
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_41161| Best HMM Match : TSP_1 (HMM E-Value=6e-22) 28 7.4
SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35) 28 7.4
SB_19362| Best HMM Match : M (HMM E-Value=0.0014) 28 7.4
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 28 7.4
SB_9442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032) 28 9.8
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_19865| Best HMM Match : cNMP_binding (HMM E-Value=8.3e-39)
Length = 373
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 515 QQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKV-VHTYEGS 691
+ + +LD+MFEK+ P E +I+ GD+GDNFYVI G +DV + + VHT+ G+
Sbjct: 130 EDLDVILDSMFEKKVSPEEIIIKVGDEGDNFYVINTGEYDVFALDTNTGASIKVHTFNGT 189
Query: 692 GSFGELALMYNMPRGGICTGPDRRALWA 775
G FGELALM+N R LWA
Sbjct: 190 GMFGELALMHNSLRNATIVAKTEGTLWA 217
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 518 QMQQVLDAMFEKRSEPGEYVIRQGDDGDN-FYVIENGVFDVLVTGDDRVEKVVHTYEGSG 694
++ +V DA++ K + GE VIR+G++ Y IE G V V D VEK V
Sbjct: 255 ELDKVSDALYPKEFKDGEAVIREGNESAYCMYFIEKGKVRVTVK-DGEVEKTVEF--DKN 311
Query: 695 SFGELALMYNMPR 733
FGELAL+ N PR
Sbjct: 312 YFGELALVMNQPR 324
Score = 31.5 bits (68), Expect = 0.79
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 148 RIQVPDDLREILLEFTISYLLEQPGDVINYAVEFFTGYK 264
+ +P L +L EF + + E P D++ +A ++F K
Sbjct: 6 QFSIPPGLSSLLEEFVVKCIQENPEDIVEFAADYFNMLK 44
>SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +3
Query: 261 QNNRTTTIVRGPVAGTPDESIISDEE----EPPVARFNNRRKSVFAETYDPEEDDSDEGA 428
+ N+ + GP D++ DE+ EPP R+ RR+SV AE + P+ +D +
Sbjct: 62 EKNKEKGVSFGPPGNDEDDTYNEDEDDEMPEPPKNRYA-RRQSVCAEPFHPDSEDEGDEQ 120
Query: 429 PAVFPKSDAQRARLAEAVRGILLFRSLTRSK 521
P V+PK+D QR RL +A++ ILLF++L + +
Sbjct: 121 PIVYPKTDEQRQRLNDAIKNILLFKNLAKEQ 151
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/35 (60%), Positives = 32/35 (91%)
Frame = +2
Query: 515 QQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIE 619
+Q+ +VLDAMFE++++ G+++I QGDDGDNFYVI+
Sbjct: 150 EQLNEVLDAMFERKTQAGDHIIDQGDDGDNFYVID 184
>SB_12691| Best HMM Match : cNMP_binding (HMM E-Value=1.7e-26)
Length = 376
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 509 DAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEG 688
+A Q+++V++ M E+ + EY+I++ + G + YV+E G V G V + G
Sbjct: 158 EASQVREVVECMCERMFKRDEYIIKEKEPGSHLYVLEEGKCQVTKEG------TVLGHMG 211
Query: 689 SG-SFGELALMYNMPRGGICTGPDRRALWA 775
G +FGELA++YN R LWA
Sbjct: 212 PGKAFGELAILYNCTRTASVRAQTSGKLWA 241
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 527 QVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENG-VFDVLVTGDD 655
++ D + E E GEY+IRQG GD F++I++G ++V G+D
Sbjct: 282 KIADVIEETFYEEGEYIIRQGARGDTFFIIKSGNGLCLVVDGED 325
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 509 DAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEG 688
+A Q+++++D M+ + + +I++GD G+ Y I +G V R KV+
Sbjct: 491 EAAQVRKIVDCMYSNTFQRNDVIIQEGDAGNALYAIADGRLQVT-----RENKVLGEMVA 545
Query: 689 SGSFGELALMYNMPRGGICT 748
FGELA++YN R T
Sbjct: 546 GMVFGELAILYNCRRTATVT 565
>SB_59756| Best HMM Match : cNMP_binding (HMM E-Value=5.7e-21)
Length = 858
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 491 TAVPFSDAQQMQQVLDAMFEKRSEP---GEYVIRQGDDGDNFYVIENGVFDVLVTGDDRV 661
T VPF + + D + + + E G+Y+ R G GD Y I+ G+ D+L
Sbjct: 620 TTVPFFSGASISFITDIVTKLKFEVFLNGDYICRSGHRGDKMYFIQKGIVDILTR----- 674
Query: 662 EKVVHTYEGSGS-FGELALM 718
E + T G GS FGE+ L+
Sbjct: 675 EGALATSLGDGSHFGEICLL 694
>SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26)
Length = 370
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 509 DAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVL---VTGDDRVEKVVHT 679
D + V DA+ + + G+ V+ QG+ GD F++I G VL +D +E V
Sbjct: 249 DKWERLTVADALEPTQFQDGDDVVVQGEHGDEFFIIVEGTAVVLQRRSANEDFIE--VSR 306
Query: 680 YEGSGSFGELALMYNMPR 733
S FGE+AL+ N PR
Sbjct: 307 LGPSDYFGEIALVLNRPR 324
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 668 VVHTYEGSGSFGELALMYNMPRGGICTGPDRRALWA 775
+V T GSFGELAL+Y PR LWA
Sbjct: 179 LVSTIGEGGSFGELALIYGTPRAATIKAKTDVKLWA 214
>SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRGGI 742
PG+++ RQG+ G Y++ G +VL D E V+ T FGE++L+ G +
Sbjct: 547 PGDFICRQGEKGREMYIVNKGSLEVL----DEKETVLATLSAGSHFGEISLLNMKGIGNL 602
Query: 743 CTGPDR 760
T R
Sbjct: 603 RTASVR 608
>SB_43598| Best HMM Match : cNMP_binding (HMM E-Value=4.3e-22)
Length = 581
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +2
Query: 503 FSDAQQ--MQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVH 676
F+D + +++++ + + PG+Y+ R+GD G Y++ +G V+ GDD +
Sbjct: 455 FADCEPGLLREIVVKLRSQVFSPGDYICRKGDVGREMYIVNSGCLQVV--GDDGTTVLAI 512
Query: 677 TYEGSGSFGELALM 718
EGS FGE++++
Sbjct: 513 LSEGS-YFGEISIL 525
>SB_33011| Best HMM Match : cNMP_binding (HMM E-Value=0.037)
Length = 210
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGS-FGELALM 718
PG+Y+ R G+ G Y+I +G +V+V EK+V G+ FGE++L+
Sbjct: 150 PGDYICRCGEIGREMYIINHGKVEVVVPDSTTGEKIVVASLTEGNYFGEISLL 202
>SB_18428| Best HMM Match : cNMP_binding (HMM E-Value=0.037)
Length = 210
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGS-FGELALM 718
PG+Y+ R G+ G Y+I +G +V+V EK+V G+ FGE++L+
Sbjct: 150 PGDYICRCGEIGREMYIINHGKVEVVVPDSTTGEKIVVASLTEGNYFGEISLL 202
>SB_56249| Best HMM Match : cNMP_binding (HMM E-Value=5.4e-23)
Length = 279
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 560 EPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPR 733
+PG+Y++ GD G Y I G ++L + V+ T FGE+ L+Y R
Sbjct: 148 KPGDYIVYAGDMGREMYCIRRGQVNILCE-----DNVIGTLGPGSFFGEIGLIYGESR 200
>SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 35.1 bits (77), Expect = 0.064
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALM 718
PG+YV R+G+ G Y++ G +V+ + K+ E FGE++++
Sbjct: 403 PGDYVCRKGEVGREMYIVNRGKLEVV---SEHGTKIYAVLEAGSYFGEISVL 451
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 337 KSRQWRALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLRRS 483
KS + RA ++ ++P+ +TPK ++ ++ L PSR P S +R+
Sbjct: 603 KSARTRAWSVSPRLYTPKSITPKFILSPRQTLSAPPSRPKTAPTSAQRT 651
>SB_16528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 551 KRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTG 649
+R PG+Y+I+QGD+ Y I G +VL G
Sbjct: 81 RRHLPGQYLIKQGDEVKKLYFIAKGFVEVLKDG 113
>SB_19072| Best HMM Match : RIIa (HMM E-Value=3.5e-07)
Length = 74
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 154 QVPDDLREILLEFTISYLLEQPGDVINYAVEFFTGYKT 267
+VP L ++L F ++ L E+P DV+ + +FF T
Sbjct: 7 EVPQGLEDLLEAFILTVLKEKPEDVVKFGSQFFASANT 44
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 366 RRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRS 506
RR SV E Y+P + A +PKS+ R RL + I +F+S
Sbjct: 291 RRDSVAGEVYEPVNSNC-VSAQRFYPKSEDARKRLENVIGNIFIFKS 336
>SB_48433| Best HMM Match : Ion_trans (HMM E-Value=6.1e-26)
Length = 1344
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSG-SFGE-LALMYNMPRG 736
PG+++I QGD+ + Y + G +VL DD + ++ G G SFGE L N P G
Sbjct: 1004 PGDFIIYQGDEISHLYFLVRGTVEVL--KDDTIMAIL----GKGDSFGENFGLSPNRPPG 1057
>SB_50313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 31.5 bits (68), Expect = 0.79
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTG 649
PG Y+I++GD+ Y + G DV+ +G
Sbjct: 50 PGHYIIKEGDEVKYLYFVVEGTVDVIKSG 78
>SB_11282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 14/72 (19%)
Frame = +2
Query: 560 EPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRV--------------EKVVHTYEGSGS 697
E +I+QG G +FY I +G V +DR K++ G S
Sbjct: 185 EQDRVIIKQGHIGVSFYFIVSGSVVVQRVEEDRTTGEKHNQSMIIAYFSKIISEMTGGDS 244
Query: 698 FGELALMYNMPR 733
FGELALM+++ R
Sbjct: 245 FGELALMHDIRR 256
>SB_21541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 355 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSL 474
ALT + PFSP + P + LT P SP++ P SL
Sbjct: 61 ALTAYSRPFSPDSLFPPPLALTAYSRPFSPAKLIARPFSL 100
>SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25)
Length = 816
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 563 PGEYVIRQGDDGDNFYVIENGVFDVLVTG 649
PG +++ +GD+ D ++I+ G +++V G
Sbjct: 503 PGHFIMYEGDEVDTLHLIKRGKIEIIVNG 531
>SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 566 GEYVIRQGDDGDNFYVIENGVFDVLVTGD-DRVEKVV 673
GEY+IR+GD G +++ G ++ + D +++E++V
Sbjct: 212 GEYIIRKGDIGQQLIILKRGTAAIVKSEDPEKLEEMV 248
>SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 24.2 bits (50), Expect(2) = 2.3
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 705 SPNEPE-PSYVWTTFSTRSSPVTRTSKTPFS 616
+PN P+ PS+ W + S R +P S
Sbjct: 250 NPNNPDQPSFAWPAYDAGSQHYLRLKPSPSS 280
Score = 24.2 bits (50), Expect(2) = 2.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 513 ASENGTAVCPGPPQRDGLSVRPTW 442
ASE T V P P R G + TW
Sbjct: 301 ASERSTVVPPACPPRSGATHDDTW 324
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = -2
Query: 708 SSPNEPEPSYVWTTFSTRSSPVT-RTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASR 532
S+P+ P T ST S+P T T TP + +PS+PC + +P + + S
Sbjct: 19 STPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHS-TPSAPSTPSTPST 77
Query: 531 TCCICCASENGTAVCPGPPQRDGLSVRPT 445
C S T P P P+
Sbjct: 78 PCTPSTPSTPSTPSTPSTPSTPSAPSTPS 106
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 575 VIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRGGICTG 751
++RQG+ G+ FY+I G V D E H + S E L++ + G
Sbjct: 811 IMRQGEKGNCFYIILKGSVSVYAKQDGDGEAATHHEQSVRSHKERLLLFGAELSSLRAG 869
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = -2
Query: 735 PRGMLYIRASSPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLS--PSSPCLITYSPG 562
P G + + ++P + + + ++ P R ++TP S S PSSPC + S
Sbjct: 890 PSGRVSLTKNAPKSVQTTSKRPQDNLKNFPSPRKTRTPSSHQSPQSAPPSSPCTPSSSTA 949
Query: 561 SDLFSNIASRTCCICCASENGTAVCPGPPQRD 466
L +N S + + N + C PP D
Sbjct: 950 PPLPTNPKSPSEAPSLNNPNPRSSCTTPPSSD 981
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -2
Query: 711 ASSPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSD 556
A S N P P TT SS T +S S T SPSS + +PG D
Sbjct: 962 APSLNNPNPRSSCTT--PPSSDTTNSSSAGPSATNNASPSSSPYVASAPGKD 1011
>SB_49169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Frame = +3
Query: 348 VARFNNRRKSVFAETYDPEEDDSDEGAPAVFP--KSDAQRARLAE---AVRGILLFRSLT 512
V R K A+ D E D +EGAPA P K RA L E A +G +
Sbjct: 114 VDRVKKMHKKKMAKKEDEEMDVPEEGAPAKKPAVKKLGSRAALRECIAAAKGKGCNNTKD 173
Query: 513 RSKCSRFWMRCSKR 554
C+R ++ C KR
Sbjct: 174 CRPCARGFVLCMKR 187
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +3
Query: 231 QLRGRVLHRLQNNRTTTIVRGPVAGTPDESIISDEEEP-PVARFNNRRKSVFAETYDPEE 407
Q+ G+ Q N + + P + D++ P + S AE P E
Sbjct: 237 QVSGKEKPEGQENPVDSQLSEPAEQAQESEKADDKKSTEPAEPVEQSQDSGVAEAESPAE 296
Query: 408 DDSDEGAPAVFPKSD 452
DS+EG P + P D
Sbjct: 297 QDSEEGTPGMSPPVD 311
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 773 PTERGGLGPYRCRPAACCTSGPVRQTNRNLRMCGPP 666
PT GP PAA SGP + RN+R P
Sbjct: 1066 PTHTPNSGPLEENPAASSPSGPPAKQRRNVRFVANP 1101
>SB_47365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +3
Query: 417 DEGAPAVFPKSDAQRARLAEAVRGILLFRSLTRSKCSRFWMRCSKRDPS 563
DE P V P DA R + I L S T S+FWM+CS R+ S
Sbjct: 446 DEARP-VLP--DAPRYPPINSGDKIALKMSYTSGDLSKFWMKCSDRECS 491
>SB_44854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 724 VVHQGQFAKRTGTFVCVDHLFDAVV 650
+VH G RTGTF+ +D L D +V
Sbjct: 489 LVHCGAGVGRTGTFIAIDSLMDQMV 513
>SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +3
Query: 417 DEGAPAVFPKSDAQRARLAEAVRGILLFRSLTRSKCSRFWMRCSKRDPS 563
DE P V P DA R + I L S T S+FWM+CS R+ S
Sbjct: 36 DEARP-VLP--DAPRYPPINSGDKIALKMSYTSGDLSKFWMKCSDRECS 81
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 405 LRGHKSRRKRICADC*SAPLAALLRLILWTHQVCRRQDPVRWSSSCCFVTCEELD-RVVD 229
L G+ ++R I A L L L+ + + C R P ++ + CC V + +D R D
Sbjct: 911 LPGNNNKRHEITA------LPFTLHLVNYEGKNCSRCPPAKYCTGCCIVGNDVIDLRWND 964
Query: 228 HVPRLLQQIT 199
H+ L +T
Sbjct: 965 HIAIQLTNLT 974
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 394 MTPKRMILTKEPLPCSPSRTHRE 462
MTP R LT LPC SRT+ E
Sbjct: 941 MTPSRASLTPTHLPCRDSRTNSE 963
>SB_55670| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-29)
Length = 637
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 606 KLSPSSPCLITYSPGSDLFSNIASRTCCICCASENGTAVCPGPP 475
K SP+ P TY P S+ F+ I T E+ +++ PG P
Sbjct: 589 KTSPNFPSASTYPPMSEWFNRIPGSTHHDHFHMESSSSLAPGQP 632
>SB_49167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Frame = +3
Query: 348 VARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSD--AQRARLAE---AVRGILLFRSLT 512
V R K A+ D E D +EGAPA P + RA L E A +G +
Sbjct: 114 VDRVKKMHKKKMAKKEDEEMDVPEEGAPAKKPAVEKLGSRAALRECIAAAKGKGCNNTKD 173
Query: 513 RSKCSRFWMRCSKR 554
C+R ++ C KR
Sbjct: 174 CRPCARGFVLCMKR 187
>SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 345
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Frame = -2
Query: 705 SPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASRTC 526
+PN P Y+W S + TS L+ S+P +TY + + TC
Sbjct: 93 NPNHVVPYYIWQYVEILGSTASITSLCVIGYDRHLAISAP--LTYHARMTSRRALVAITC 150
Query: 525 C----ICCASENGTAVCPGPPQRDGL 460
C CCA+ + + P G+
Sbjct: 151 CWVYAACCAALSFVNISPSIQPTSGI 176
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 700 KRTGTFVCVDHLFDAVVSGDQDVENAVLDDVE 605
K + FVCVDH + V DV A+L VE
Sbjct: 105 KHSSQFVCVDHDAEYVPGSGADVNGALLYPVE 136
>SB_29710| Best HMM Match : LHC (HMM E-Value=3.3)
Length = 343
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 619 LDDVEVVAVIALSDYVLAGLGSLFEHRI 536
++ V++ VIAL D V+AG +L HR+
Sbjct: 311 MEQVQLAGVIALLDVVVAGSTALIAHRL 338
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 569 EYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALM 718
+Y++ +GD G +I+ G +V +TG+D +V+ E +G+ L+
Sbjct: 816 DYILHKGDIGQQLIIIKRGTAEV-ITGED--PEVILPLEEMSFYGDRYLL 862
>SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 619 LDDVEVVAVIALSDYVLAGLGSLFEHRI 536
++ V++ VIAL D V+AG +L HR+
Sbjct: 498 MEQVQLAGVIALLDVVVAGSTALIAHRL 525
>SB_41161| Best HMM Match : TSP_1 (HMM E-Value=6e-22)
Length = 649
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 434 RVPQVGRTESPSR*GGPGHTAVPFSDAQQMQQVLDAMFEKRSE 562
R P G ++ S PG + VPF Q+VL EK +E
Sbjct: 174 RAPIYGHMDATSFTNRPGASRVPFYKTMDQQRVLQQSREKNTE 216
>SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)
Length = 442
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 148 RIQVPDDLREILLEFTISYLLEQPGDVINYAVEFF 252
+++VP + +L L EQP D++ +A ++F
Sbjct: 9 KLRVPPGFQNLLEGLAREVLREQPDDIVQFAAQYF 43
>SB_19362| Best HMM Match : M (HMM E-Value=0.0014)
Length = 722
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +2
Query: 587 GDDGDNFYVIENGVFDV---LVTGDDRVEKVVHTYEGS 691
G DG+ + IENG DV L+ ++R+ +++ YEG+
Sbjct: 204 GRDGNKYMGIENGKADVSEKLLQENERLRELLRQYEGN 241
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 312 DESIISDEEEPPVARFNNRRKSVFAETYDPEEDDSD 419
D +SDE + V N R+++ Y+ ++DDSD
Sbjct: 447 DYDYVSDESDDWVPFDRNSRRNINNNNYESDDDDSD 482
>SB_9442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 667 LFDAVVSGDQDVENAVLDDVEVVAVIALSD-YVLAGLGSLFEHRIQNLL 524
+F AVVS +NA L D + V+ +D Y+L GL L EH+I LL
Sbjct: 40 VFAAVVSFVYR-DNAELTDEILYNVLCAADIYLLHGLKRLCEHKISGLL 87
>SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Frame = -2
Query: 705 SPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASRTC 526
+PN P Y+W S + TS L+ S+P +TY + + TC
Sbjct: 93 NPNHVVPYYIWQYVEILGSTASITSLCVIGYDRHLAISAP--LTYHARMTSRRALVAITC 150
Query: 525 C----ICCASENGTAVCPGPPQRDGL 460
C CCA+ + + P G+
Sbjct: 151 CWVYAACCAALSFVNISPSIQPTSGI 176
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 667 LFDAVVSGDQDVENAVLDDVEVVAVIALSD-YVLAGLGSLFEHRIQNLL 524
+F AVVS +NA L D + V+ +D Y+L GL L EH+I LL
Sbjct: 262 VFAAVVSFVYR-DNAELTDEILYNVLCAADIYLLHGLKRLCEHKISGLL 309
>SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032)
Length = 807
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 110 SLSRYYPSGNCRATRY 63
SLSRYYPSGN ++ Y
Sbjct: 278 SLSRYYPSGNSQSRYY 293
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 774 AHRARRSGPVQMPPRGMLYIRASSPNE-PEPSYVW 673
AH S P Q PRG Y+ ASSP PSY W
Sbjct: 2089 AHLLADSNPGQALPRG-AYVYASSPLPLKAPSYYW 2122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,313,803
Number of Sequences: 59808
Number of extensions: 563220
Number of successful extensions: 2089
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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