Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00351
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 43 4e-05
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 42 1e-04
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 41 2e-04
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 41 2e-04
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 39 7e-04
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 39 7e-04
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 37 0.003
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 36 0.005
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 36 0.005
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 32 0.11
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 30 0.44
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.44
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.58
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 29 1.0
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 28 1.4
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 26 5.5
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 7.2
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 26 7.2
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 9.5
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 43.2 bits (97), Expect = 4e-05
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 538 SWRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLIANI 675
SWR + L G + + VL+LPESPR L+ R E+AL+++ N+
Sbjct: 177 SWRTSFGINMLWGILLMVGVLFLPESPRYLIYKGRDEEALRIMCNM 222
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 41.5 bits (93), Expect = 1e-04
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLIA 669
WR+ + + L G I I + +LPESPR L+ R E+AL+++A
Sbjct: 178 WRVSMGINLLWGIITFIGISFLPESPRYLISVGRDEEALQIMA 220
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLIANIH 678
WR+ +G+ P I + + PESPR LL N EK K+++ IH
Sbjct: 239 WRIMFGIGAAPALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIH 284
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLIA 669
WR+ + + L G I I +L+LPESPR L+ + E+A+++++
Sbjct: 182 WRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLS 224
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 538 SWRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLI 666
SWR + L G + VL+LPESPR L+ R E+AL+++
Sbjct: 177 SWRTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEALRIM 219
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLI 666
WR+ + + L G I + +++LPESPR L+ + ++ALK++
Sbjct: 148 WRISIGINLLWGIITLVGIIFLPESPRYLIAIGKDDEALKIM 189
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLIANIH 678
WR + L +P +++LPESPRLL+ R ++A +A I+
Sbjct: 246 WRWMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLARIY 291
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLI 666
WR+ + + L G I I + +LPESPR L+ + E+AL ++
Sbjct: 178 WRVSMGINLLWGIIMFIGISFLPESPRYLIAIGKDEEALDIM 219
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 520 TLLPIYSWRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLI 666
T P WR+ + + L G + +L+LPESPR L R E+ +K++
Sbjct: 173 TTHPEAQWRVPIGINLLWGILMFFGMLFLPESPRYLAVKGRNEECMKIL 221
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.9 bits (69), Expect = 0.11
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 541 WRLFLALGSLPGFIAGIWVLYLPESPRLLLDTNRGEKALKLI 666
WR+ + + L G I + V +L ESPR L+ + ++A++++
Sbjct: 178 WRVSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVM 219
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 29.9 bits (64), Expect = 0.44
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 165 GLINMAFMSGGVASAFFWGIVGDVFGRK 248
GL+N A G V +G +GD FGRK
Sbjct: 91 GLVNAAANIGNVFGQILFGFMGDFFGRK 118
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 29.9 bits (64), Expect = 0.44
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 323 LLAARTINGFIIGGPATLVFTYLSDLVGVKKRQFYLSMVGMSF 451
L+AAR I G GG + V +SD+V +K+R Y ++ + F
Sbjct: 180 LVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFF 222
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 29.5 bits (63), Expect = 0.58
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 165 GLINMAFMSGGVASAFFWGIVGDVFGRK 248
GL+N A G + +G +GD FGRK
Sbjct: 96 GLVNAASNIGNIFGQLMFGFMGDFFGRK 123
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 28.7 bits (61), Expect = 1.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 165 GLINMAFMSGGVASAFFWGIVGDVFGRK 248
G++N A G + +G +GD FGRK
Sbjct: 86 GVVNAATNIGNIMGQLLFGFLGDFFGRK 113
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 165 GLINMAFMSGGVASAFFWGIVGDVFGRK 248
GL+N + G + +G +GD FGRK
Sbjct: 96 GLVNASANIGNIFGQLLFGFMGDFFGRK 123
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 81 FASGVQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKST 254
F S + I++ + P E +L A I A++ A +G + D+FGR+ T
Sbjct: 42 FLSALDMTIVASLYPVIGSEFKLMN-NASYIVTAYLITNTAFQPLYGRLSDIFGRRPT 98
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 369 LHWSSRIYQT*LELRRDNS 425
+HW+S +YQ L L+ +NS
Sbjct: 381 VHWNSTVYQELLNLKSNNS 399
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 571 VDCPGQGTTSTSKLARALDSPDFK 500
++C QGT ST +++ L+S DFK
Sbjct: 588 LNCRYQGTDSTLMISKPLESWDFK 611
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 580 IAGIWVLYLPESPRLLLDTNRGEKALKLIANI 675
IAG+ LYL P LLDT+ K +L+ N+
Sbjct: 1141 IAGLLKLYLRNLPTNLLDTSM-HKLFELLPNV 1171
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,365,493
Number of Sequences: 5004
Number of extensions: 69823
Number of successful extensions: 179
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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