Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00350
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   7.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   7.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.5  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   9.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.5  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 243 FEQSPRLLAIRLNGREICNANNPQPALESPL 335
           FE++ RL AIRL+G  + + N    ++ S L
Sbjct: 522 FERNMRLEAIRLDGNFLSDINGVFTSIASLL 552


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/36 (27%), Positives = 13/36 (36%)
 Frame = +2

Query: 557 PDVRPEHLLQTRPVQGRPSTEAERPVYVKPVNSANP 664
           P  RP H    R  +        RPVY+      +P
Sbjct: 79  PQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHP 114



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/36 (25%), Positives = 14/36 (38%)
 Frame = +2

Query: 557 PDVRPEHLLQTRPVQGRPSTEAERPVYVKPVNSANP 664
           P  RP H    R  + +      RP+Y+      +P
Sbjct: 51  PQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPPHP 86


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 766 GSGRAGVNLGLLFEALCPDSDIRLR 692
           G+ RAG   G + + LCP  +   R
Sbjct: 250 GNFRAGPTPGTILKKLCPQEEACFR 274


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 766 GSGRAGVNLGLLFEALCPDSDIRLR 692
           G+ RAG   G + + LCP  +   R
Sbjct: 165 GNFRAGPTPGTILKKLCPQEEACFR 189


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 766 GSGRAGVNLGLLFEALCPDSDIRLR 692
           G+ RAG   G + + LCP  +   R
Sbjct: 484 GNFRAGPTPGTILKKLCPQEEACFR 508


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 129 LDRRCHNARQHELQNRKHADEDQS 200
           +D     + QH LQNR + ++  S
Sbjct: 196 IDPELTESEQHRLQNRLYTNDSTS 219


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 129 LDRRCHNARQHELQNRKHADEDQS 200
           +D     + QH LQNR + ++  S
Sbjct: 234 IDPELTESEQHRLQNRLYTNDSTS 257


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +2

Query: 482 KTANSY*K---TQDPVVRPQIPDTRTQSPDVRPEHLLQTRPVQGRPSTEAERPVYVKP 646
           K  NSY K   T     R +    R++   + P H ++  PV         RP+ V+P
Sbjct: 284 KNENSYRKYRETSKERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRP 341


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 154 DNMNFKIESTQTKINPGPATAVRFFV 231
           D++      +QT+ N GP + VRF V
Sbjct: 583 DSLRGSTTDSQTEDNFGPLSNVRFAV 608


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,369
Number of Sequences: 438
Number of extensions: 4851
Number of successful extensions: 45
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)