Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00348
         (752 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0791 + 6627961-6630702                                           30   1.7  
09_06_0066 + 20641144-20641459,20642899-20643290,20643379-206438...    29   4.0  
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273...    28   9.2  

>11_01_0791 + 6627961-6630702
          Length = 913

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
 Frame = +2

Query: 8   EDYETIIREAIMKGYV-EMNGMRLELNKPEDI-EV-LGELIYSTVDKVDE 148
           ED+  I RE++++ +V E   +R+E N+PED+ E+ L ELI+  + +VDE
Sbjct: 439 EDFR-ISRESLVRYWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDE 487


>09_06_0066 +
           20641144-20641459,20642899-20643290,20643379-20643829,
           20643985-20644046
          Length = 406

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 27/77 (35%), Positives = 35/77 (45%)
 Frame = +2

Query: 20  TIIREAIMKGYVEMNGMRLELNKPEDIEVLGELIYSTVDKVDEGVKCVEAYRYLLIIMKS 199
           T+ RE +M+  V M       N PE IE+ G   Y   +    GV+        L+  KS
Sbjct: 147 TLSREGVMRHLVGMKNTLSRFN-PEGIEIDG---YGNYNLEVGGVEGT------LLANKS 196

Query: 200 VLGLNTLESDKYFVVPS 250
           VL L  L+S  Y  VPS
Sbjct: 197 VLNLYFLDSGDYSTVPS 213


>08_02_0210 +
           14324539-14324609,14324735-14325740,14325838-14327390,
           14327473-14327601,14328345-14328510
          Length = 974

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 366 TLFPWCESRKCSC**THNLLRRIP 437
           ++FPW E R+C C    N + + P
Sbjct: 568 SVFPWAEHRECFCHLMQNFVEKFP 591


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,608,448
Number of Sequences: 37544
Number of extensions: 337223
Number of successful extensions: 790
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)