Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00348
         (752 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30530.1 68415.m03718 expressed protein                             31   1.1  
At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar ...    29   2.5  
At3g47400.1 68416.m05154 pectinesterase family protein similar t...    29   3.3  
At2g27010.1 68415.m03243 cytochrome P450 family protein similar ...    29   3.3  
At4g12010.1 68417.m01911 disease resistance protein (TIR-NBS-LRR...    29   4.4  
At1g66960.1 68414.m07614 lupeol synthase, putative / 2,3-oxidosq...    28   7.7  
At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 fam...    28   7.7  

>At2g30530.1 68415.m03718 expressed protein
          Length = 371

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 352 YTKEELYFPGVKVENVVVDKLITYFDEYLMDMSNAVVLNEEEMKKASSD 498
           YT+E LY  GV   + +  + + YFDE   +++    +N   M  +S +
Sbjct: 311 YTRENLYLRGVVEYHQLTMQDVVYFDEKTEEVTEVYPINVSSMSSSSDN 359


>At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar to
           beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
           GI:8918271 from [Pisum sativum]
          Length = 759

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
 Frame = +1

Query: 286 LFYQLQKRLI----DFVYLFKKRLPCYTKEELYFPGVKVENVVVDKLITYFDEYLMDMSN 453
           L  QL+K L     + +   K R  C  KE+ Y+P   V+ +V D L  + + +L     
Sbjct: 283 LILQLRKELYLQPYEEINWMKVRHLC-AKEDTYYPRPLVQELVWDSLYIFAEPFLARWPF 341

Query: 454 AVVLNEEEMKKASSDMNFLYAKSGSTISLSKYLLTLCLINQWI 582
             +L E+ ++ A   +++   ++   I++      LC++  W+
Sbjct: 342 NKLLREKALQLAMKHIHY-EDENSRYITIGCVEKVLCMLACWV 383


>At3g47400.1 68416.m05154 pectinesterase family protein similar to
           pectinesterase (EC 3.1.1.11) from Vitis vinifera
           GI:15081598, Lycopersicon esculentum SP|Q43143
           SP|P14280; contains Pfam profile PF01095 pectinesterase
          Length = 594

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 287 SGSRKAVWYDCVHLAQRSICQI 222
           +  RKA W DCV+L Q ++ Q+
Sbjct: 148 NNQRKAAWSDCVNLFQNTVAQL 169


>At2g27010.1 68415.m03243 cytochrome P450 family protein similar to
           Cytochrome P450 93A1 (SP:Q42798)  {Glycine max};
          Length = 498

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 501 HVRRCFLHFFFIQYDCVTHVHQVFVEVSYEFINN-YIFDFHTREIEFLFGVTR 346
           H++  F+  FF   D  TH  Q    +  E INN YI +    EI+ + G TR
Sbjct: 276 HIKSLFVDLFFAGTDTWTHAIQ---WIMAEIINNSYILERLREEIDSVVGKTR 325


>At4g12010.1 68417.m01911 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1219

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 238 EVFVRFQSIKTENRFHDN*KVAVSFNTLDTLVDLIYRAIDEFTEYFD 98
           +VF+ F+   T N F  + + A+    +D+ +D   R  D  T  FD
Sbjct: 12  DVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTALFD 58


>At1g66960.1 68414.m07614 lupeol synthase, putative /
           2,3-oxidosqualene-triterpenoid cyclase, putative similar
           to lupeol synthase GI:1762150 from [Arabidopsis
           thaliana], 2,3-oxidosqualene-triterpenoid cyclase
           [Arabidopsis thaliana] GI:2738027
          Length = 763

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
 Frame = +1

Query: 283 PLFYQLQKRL----IDFVYLFKKRLPCYTKEELYFPGVKVENVVVDKLITYFDEYLMDMS 450
           PL  QL++ L     + +   K R  C  KE+ Y+P   V++++ D L T+ +  L    
Sbjct: 282 PLIMQLREELHLQPYEEINWNKARHLC-AKEDKYYPHPLVQDLIWDALHTFVEPLLASWP 340

Query: 451 NAVVLNEEEMKKASSDMNFLYAKSGSTISLSKYLLTLCLINQWI 582
              ++ ++ ++ A   +++   ++   I++      LC++  WI
Sbjct: 341 INKLVRKKALQVAMKHIHY-EDENSHYITIGCIEKNLCMLACWI 383


>At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 family
           protein similar to  PHO1 protein [Arabidopsis thaliana]
           GI:20069032; contains Pfam profiles PF03105: SPX domain,
           PF03124: EXS family
          Length = 747

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -1

Query: 668 FDKVYSVVIDVQHI---SELVFFRSQKHSHDTIH*FIRHNVNRYFERLMV 528
           F+K  + ++ V  +   SELVFF++     D ++ F R NV    +  +V
Sbjct: 87  FEKYETTILKVSEVGRESELVFFKTLDLEFDKVNRFYRSNVEELVKEAVV 136


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,887,410
Number of Sequences: 28952
Number of extensions: 295645
Number of successful extensions: 826
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)