Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00347
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.3  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   7.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 436 LAFNIDSMHCDKSGSTTAC 492
           LAF+ID   CD  G    C
Sbjct: 71  LAFDIDKQTCDWKGKVNNC 89


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 357 FKCKNENVIEFKMADVKWSPFCCN 286
           +KC+N+  +++ + D + S   CN
Sbjct: 46  WKCENQKCVKYLVEDEETSLATCN 69


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 356 NRFLEKISTRTTHSNPCRKIYC 421
           N+F  + +  T+  NPC   +C
Sbjct: 677 NKFYRQEAQWTSSDNPCTTCFC 698


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 146 QVYILLFNRSIGRVH 190
           QVY+ L   S+G VH
Sbjct: 97  QVYVCLAKNSVGSVH 111



 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 308  LTSAILNSITFSFLHLNRFLEKISTRTTHSNP 403
            LTS   NS+TF        +E I   T H  P
Sbjct: 1404 LTSTTTNSLTFKLKPHESDVEPIHGYTIHYKP 1435



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 88  TGNGSLVRSKRDSAIRANETGIY 156
           T NG +V     +AI  N+ G+Y
Sbjct: 467 TVNGDVVSHLNITAIHTNDGGLY 489


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 389 THSNPCRKIYCLSVFNWRSILIVCIAISPGRRPLA 493
           TH+ PC+   C   F+   +L   I    G +P +
Sbjct: 3   THTLPCKCTICPKAFSRPWLLQGHIRTHTGEKPFS 37


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 201 VVSFSTSLYFKCTEL 245
           +VSF+T+LYF   +L
Sbjct: 167 IVSFATNLYFIIIQL 181


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 206 YYRLFYGHVLLNG*IIIY 153
           YY  F+G  L  G +IIY
Sbjct: 116 YYYAFFGVHLAYGVVIIY 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,229
Number of Sequences: 336
Number of extensions: 2529
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)