Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00347
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001278-1|AAN71034.1|  729|Drosophila melanogaster AT07729p pro...    29   5.9  
AE013599-3551|AAF46962.2|  729|Drosophila melanogaster CG12192-P...    29   5.9  
BT023319-1|AAY55735.1|  413|Drosophila melanogaster IP10558p pro...    28   7.8  
AE013599-3314|AAF46789.1|  413|Drosophila melanogaster CG13501-P...    28   7.8  

>BT001278-1|AAN71034.1|  729|Drosophila melanogaster AT07729p
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 158 LLFNRSIGRVHRIVCS 205
           LLF RS GRVH++VC+
Sbjct: 10  LLFQRSDGRVHQVVCT 25


>AE013599-3551|AAF46962.2|  729|Drosophila melanogaster CG12192-PA
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 158 LLFNRSIGRVHRIVCS 205
           LLF RS GRVH++VC+
Sbjct: 10  LLFQRSDGRVHQVVCT 25


>BT023319-1|AAY55735.1|  413|Drosophila melanogaster IP10558p
           protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +2

Query: 296 NGDHLTSAILNSITFSFLHLNRFLEKISTRTTHSNPCRKIYCLSVF 433
           NG H   A+  S  F+   L  ++ ++ T TT  NP  +IYCL VF
Sbjct: 321 NGLHSKRALWRSREFT--QLPCYVGRLMTSTT-DNPRLQIYCLKVF 363


>AE013599-3314|AAF46789.1|  413|Drosophila melanogaster CG13501-PA
           protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +2

Query: 296 NGDHLTSAILNSITFSFLHLNRFLEKISTRTTHSNPCRKIYCLSVF 433
           NG H   A+  S  F+   L  ++ ++ T TT  NP  +IYCL VF
Sbjct: 321 NGLHSKRALWRSREFT--QLPCYVGRLMTSTT-DNPRLQIYCLKVF 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,687,113
Number of Sequences: 53049
Number of extensions: 447430
Number of successful extensions: 1195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)