Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00346
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0587 + 19708841-19709282,19709693-19709883,19710429-197105... 40 0.002
01_02_0092 + 11057604-11057717,11058998-11059531,11060036-110601... 38 0.004
12_02_0663 + 21653536-21653541,21654027-21654212,21654316-216543... 36 0.016
03_06_0583 + 34901636-34901721,34901805-34901902,34902029-349021... 36 0.027
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 35 0.036
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 35 0.048
11_06_0606 + 25432471-25432517,25433098-25433173,25433272-254334... 33 0.11
01_05_0182 + 18989094-18989152,18989211-18989512,18990121-18991028 32 0.34
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 31 0.44
12_02_0651 + 21522089-21522128,21522472-21522593,21523386-215235... 31 0.59
09_02_0054 - 3678467-3679435,3680578-3680601 31 0.59
08_01_0817 - 7941225-7941330,7941456-7942384,7943498-7943574,794... 31 0.78
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 30 1.4
04_04_0287 - 24156285-24156389,24156477-24156596,24156654-241567... 30 1.4
06_01_0643 + 4661713-4661901,4661907-4662155,4662307-4662336 29 3.1
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 3.1
02_05_1268 - 35345283-35345462,35345577-35345636,35345719-353460... 28 4.1
10_08_0847 + 21006842-21007042,21007173-21007261,21012226-210124... 28 5.5
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 28 5.5
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 28 5.5
04_04_0224 - 23738105-23738273,23738364-23738472,23738702-237388... 28 5.5
01_07_0361 - 43058132-43058164,43058309-43058374,43058712-430587... 28 5.5
10_01_0037 + 434995-436299 27 7.2
06_03_1234 - 28586365-28587973,28590411-28590694 27 7.2
05_04_0390 - 20856510-20856520,20856827-20857049 27 7.2
04_03_0680 - 18613901-18614528,18614766-18615265 27 7.2
08_02_0732 + 20521459-20522323,20522404-20522480,20523251-205232... 27 9.6
02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404 27 9.6
>07_03_0587 +
19708841-19709282,19709693-19709883,19710429-19710568,
19710955-19711380,19711540-19712685,19712805-19712934,
19713257-19713492,19713575-19713710,19713793-19713869,
19714692-19714798,19714896-19714996
Length = 1043
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGG-GNEGIVHELHVFNTTTNQWFV 248
+W KV + +G RPRH H A A+ + VFGG ++G+ +++ +T + QW V
Sbjct: 386 RWSKV-DCSGDFFRPRHRHAAAAVDRKVYVFGGLSDDGLCSCMNIMDTASIQWNV 439
Score = 35.5 bits (78), Expect = 0.027
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 60 VKMKENAVLKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGG-GNEGIVHELHVFNTTTN 236
+ + + A ++W V +P P RH H V+ + +FGG + +++ + F+TTT
Sbjct: 427 MNIMDTASIQWN-VISPDDKWPCARHSHSLVSYGSKLFLFGGHDGQRALNDFYSFDTTTL 485
Query: 237 QW 242
+W
Sbjct: 486 KW 487
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 123 PRPRHGHRAVAIKXLMIVFGG--GNEGIVHELHVFNTTTNQW 242
P PR GH + + V GG G I++++ V + N+W
Sbjct: 346 PSPRMGHTITVVGNDIYVVGGRSGPSEILNDIWVLERSNNRW 387
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 72 ENAVLKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGG 185
+ LKW K N G P PR H K + + GG
Sbjct: 481 DTTTLKWNKE-NTNGKAPSPRFSHCMFIYKDYLGILGG 517
>01_02_0092 +
11057604-11057717,11058998-11059531,11060036-11060101,
11060201-11060367,11060445-11060592,11060673-11060763,
11060850-11061199,11061284-11061388,11061490-11061789
Length = 624
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 TGPQPRPRHGHRAVAIKXLMIVFGGGNEGI-VHELHVFNTTTNQWFVP 251
TG +P R H A + M+VFGG N V++LHV + T +W P
Sbjct: 65 TGARPGTRDSHGAALVGHRMMVFGGTNGSKKVNDLHVLDLRTKEWTKP 112
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 114 GPQPRPRHGHRAVAIKXL--MIVFGGGNEG---IVHELHVFNTTTNQWFVPVQK 260
G P PR H A ++VFGG EG ++++HV + T W P K
Sbjct: 116 GTPPSPRESHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVK 169
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 60 VKMKENAVLKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEGIVH-ELHVFNTTTN 236
V + + A + W P PR H AVA+ ++V+GG H E+ V +
Sbjct: 153 VHVLDVATMTWSSPEVKGDVVPAPRDSHGAVAVGSRLVVYGGDCGDRYHGEVDVLDMDAM 212
Query: 237 QW 242
W
Sbjct: 213 AW 214
>12_02_0663 +
21653536-21653541,21654027-21654212,21654316-21654393,
21654581-21654694,21654799-21654865,21654954-21655015,
21655123-21655262,21655552-21655678,21655758-21655872,
21656111-21656199,21656593-21656733,21657067-21657192,
21657655-21657714,21658285-21658443
Length = 489
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEG-IVHELHVFNTTTNQWFVPVQKE 263
+W ++ +GP P+PR+ H A ++ M VFGG + G + ++ V + W K
Sbjct: 48 QWARI-PVSGPLPKPRYKHAAAVVQEKMYVFGGNHNGRYLGDMQVLDFKCLSWSKLEAKI 106
Query: 264 KSHQ--DALPTAS 296
+S + D TAS
Sbjct: 107 QSEEPSDLTGTAS 119
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 84 LKWQKVYNPTGPQPRPRHGHRAVAIKX-LMIVFGGGNEGIVH-ELHVFNTTTNQWFVP 251
+ W + + TG P PR H A +++FGGG+ +LH+ + T +W P
Sbjct: 210 MTWDE-FETTGTPPSPRSEHAAACYADRYLLIFGGGSHSTCFSDLHLLDMQTMEWSRP 266
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 84 LKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGG-NEGIVHELHVFNTTTNQWFV 248
++W + + G P PR GH V + + GGG N+ V E V N +T W V
Sbjct: 261 MEWSRPEHQ-GITPEPRAGHAGVTVGENWFITGGGNNKKGVPETLVLNMSTFVWSV 315
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 260 GEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWEW 394
G P C + G L+VFGG + NDL+ L W
Sbjct: 168 GRSPSSCGGQSVTLVGGTLVVFGGEGDGRSLLNDLHVLDLETMTW 212
>03_06_0583 +
34901636-34901721,34901805-34901902,34902029-34902167,
34902262-34902290,34902406-34902502,34902593-34902648,
34902759-34902866,34902988-34903044,34905585-34905679,
34905822-34905998,34906086-34906189,34906595-34906664,
34906774-34906833
Length = 391
Score = 35.5 bits (78), Expect = 0.027
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 114 GPQPRPRHGHRAVAI-KXLMIVFGG-GNEGIVHELHVFNTTTNQWFVP 251
G P PR GH AV+I K ++VFGG ++ + ++ V++ W+ P
Sbjct: 22 GQIPAPRSGHTAVSIGKSKVVVFGGFADKRFLSDIAVYDVENRIWYTP 69
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 60 VKMKENAVLKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGG-GNEG-IVHELHVFNTTT 233
V + + L+W ++ + TG P PR GH A I+ ++VFGG G G I+ +L T
Sbjct: 163 VYIMDTMSLEWTEL-SVTGSVPPPRCGHSATMIEKRLLVFGGRGGAGPIMGDLWALKGVT 221
Query: 234 NQ 239
+
Sbjct: 222 EE 223
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 251 SPKGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQ 376
S G VPP + + RLLVFGG G DL+ L+
Sbjct: 177 SVTGSVPPPRCGHSATMIEKRLLVFGGRGGAGPIMGDLWALK 218
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGG-GNEGI-VHELHVFNTT 230
KW ++ P G P PR H A A+ ++++ GG G G+ +LHV + T
Sbjct: 156 KWSRL-TPQGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLT 204
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEG 197
+W +V GP P PR+GH + ++ GGN+G
Sbjct: 209 RWHRVV-VQGPGPGPRYGHVMALVGQRFLLTIGGNDG 244
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 245 RTSPKGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYEL----QASRW 388
R +P+GE P AA+ GT +++ GG+ G + DL+ L Q RW
Sbjct: 159 RLTPQGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW 210
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 34.7 bits (76), Expect = 0.048
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 84 LKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEGIVHELHVFNTTTNQWFVPVQK 260
+ W V P PR H A + L+I GG + ++LHV + T +W P Q+
Sbjct: 330 MTWDDVDAIGTPPPRSDHAAACHADRYLLIFGGGSHATCFNDLHVLDLQTMEWSRPKQQ 388
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 114 GPQPRPRHGHRAVAIKXLMIVFGGGNEG-IVHELHVFNTTTNQW 242
G +P+PR+ H A ++ M +FGG + G + +L + + W
Sbjct: 177 GQRPKPRYEHGATVVQDKMYIFGGNHNGRYLSDLQALDLKSLTW 220
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 84 LKWQKVYNPTGPQPRPRHGHRAVAI-KXLMIVFGGGNEGIVHELHVFNTTTNQWFV 248
++W + G P PR GH + + IV GG N+ V E V N +T W V
Sbjct: 380 MEWSRP-KQQGLAPSPRAGHAGATVGENWYIVGGGNNKSGVSETLVLNMSTLTWSV 434
>11_06_0606 +
25432471-25432517,25433098-25433173,25433272-25433448,
25433576-25433653,25433749-25433853,25434042-25434108,
25434219-25434280,25434371-25434510,25434717-25434843,
25434917-25435031,25435220-25435308,25435699-25435782,
25435961-25436737
Length = 647
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 114 GPQPRPRHGHRAVAIKXLMIVFGG--GNEGIVHELHVFNTTTNQW 242
G P R GH + ++I+FGG G +H+LH+F+ ++ W
Sbjct: 201 GDIPVARSGHTVIRAGPVLILFGGEDGKGKKLHDLHMFDLKSSTW 245
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 KGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDL--YELQASRW 388
KG++P + + + G L++FGG GK +DL ++L++S W
Sbjct: 200 KGDIPVARSGHTVIRAGPVLILFGGEDGKGKKLHDLHMFDLKSSTW 245
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 99 VYNPTGPQPRPRHGHRAVAIKXLMIVFGG 185
V + G +P PR H A + M+VFGG
Sbjct: 87 VLSTEGDKPIPRFDHAAAMVGSKMVVFGG 115
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 102 YNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEG-IVHELHVFNTTTNQW 242
Y GP PR H A+ ++++FGG ++ ++++H + T W
Sbjct: 250 YKGAGPSPRSNH-VAALYDDRILLIFGGQSKSKTLNDVHALDFETMVW 296
>01_05_0182 + 18989094-18989152,18989211-18989512,18990121-18991028
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 215 MQFVNDSFVSAAENYHQXFYGDRAMAMAGSRLRAGRIVHFLPLKYRVFLHFH 60
+QFV+ + V A+++ FY D +MA R VH LP + R H H
Sbjct: 54 IQFVDGANVGTAKHFEYMFYIDFQASMAEVRAVGDTGVHLLPPRARQLPHGH 105
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEGIVH---ELHVFNTTTNQW 242
+W +++ P G P PR H A A+ M+VF GG H +L+V + T +++
Sbjct: 89 RWTRLH-PAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKF 141
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 245 RTSPKGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLY--ELQASRWEW 394
R P GE P AA+ GT ++ GG+ G ++DLY +L +++W
Sbjct: 92 RLHPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKW 143
>12_02_0651 +
21522089-21522128,21522472-21522593,21523386-21523544,
21523653-21523730,21523821-21523865,21524121-21524187,
21524261-21524322,21524407-21524546,21524752-21524878,
21524957-21525071,21525210-21525298,21525533-21525616,
21525857-21526219,21526300-21526689,21526835-21526894,
21527530-21527553
Length = 654
Score = 31.1 bits (67), Expect = 0.59
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 VYNPTGPQPRPRHGHRAVAIKXLMIVFGG-GNEGIVHELHVFNTTTNQW 242
V + G +P PR H A + M+VFGG + ++ + + N W
Sbjct: 94 VLSTEGSRPSPRFAHAAALVGSKMVVFGGDSGDQLLDDTKILNLEKLTW 142
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 KGEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDL--YELQASRW 388
KG++P + + G L++FGG GK +DL ++L++S W
Sbjct: 187 KGDIPAARSGHTVTRAGATLILFGGEDTKGKKRHDLHMFDLKSSTW 232
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 114 GPQPRPRHGHRAVAIKXLMIVFGG-GNEGIV-HELHVFNTTTNQW 242
G P R GH +I+FGG +G H+LH+F+ ++ W
Sbjct: 188 GDIPAARSGHTVTRAGATLILFGGEDTKGKKRHDLHMFDLKSSTW 232
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 WQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEGIVH-ELHVFNTTTNQWFVPV 254
W +V GP P PR G V + GGG++ H E F+ +W V V
Sbjct: 283 WSRV-KIHGPHPTPRAGCSGVLCGTKWYIAGGGSKKKRHAETWAFDVVEYKWSVCV 337
>09_02_0054 - 3678467-3679435,3680578-3680601
Length = 330
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 111 TGPQPRPRHGHRAVAIKXLMIVFGGGNEGI--VHELHVFNTTTNQW 242
+G P PR G ++ + +FGG ++ ++EL+ F+T TN+W
Sbjct: 64 SGDVPPPRVGVTMASVGATVYMFGGRDQEHKELNELYSFDTATNRW 109
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 260 GEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWEW 394
G+VPP G + +FGG + K N+LY + W
Sbjct: 65 GDVPPPRVGVTMASVGATVYMFGGRDQEHKELNELYSFDTATNRW 109
>08_01_0817 -
7941225-7941330,7941456-7942384,7943498-7943574,
7944911-7945286
Length = 495
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 114 GPQPRPRHGHRAVAIKXLMIVFGGGNEG 197
G PRPR H + +++FGGG EG
Sbjct: 98 GASPRPRASHSLNLVAGWLVLFGGGCEG 125
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 69 KENAVLKWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNE 194
+ +AV WQ++ + T P R GH + +++FGG N+
Sbjct: 171 RSSAVFSWQQLDSGT---PSGRFGHSCSIVGDALVLFGGIND 209
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGGGNEG 197
+W +V GP P PR+GH + ++ GGN+G
Sbjct: 233 RWHRVV-VQGPGPGPRYGHVMALVGQRFLLTIGGNDG 268
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIV 176
KW ++ P G P PR H A A+ ++++
Sbjct: 161 KWSRL-TPVGEPPSPRAAHVATAVGTMVVI 189
>04_04_0287 -
24156285-24156389,24156477-24156596,24156654-24156740,
24156905-24157057,24157516-24157635,24157788-24157949,
24158029-24158247,24158574-24158616,24159147-24159210,
24159353-24159458,24159585-24159704,24159831-24159911,
24160008-24160050,24160308-24160369,24160477-24160563,
24161004-24161050,24161144-24161276,24161419-24161487,
24161924-24162010,24162317-24162448
Length = 679
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 123 PRPRHGHRAVAIKXLMIVFGGGNEGI-----VHELHVFNTTTNQW 242
P R GHR V K +++FGG + + ++LHVF+ +W
Sbjct: 177 PSARSGHRMVLYKHKIVLFGGFYDTLREVRYYNDLHVFDLDNFKW 221
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +3
Query: 87 KWQKVYNPTGPQPRPRHGHRAVAIKXLMIVFGG----GNEGIVHELHVF---NTTTNQW 242
+W+ V +P P PR H+ VA K + +FGG N+ H F + TNQW
Sbjct: 112 EWKLVSSPNSPPPRS--AHQTVAWKNNIYMFGGEFTSPNQERFHHYKDFWSLDLKTNQW 168
>06_01_0643 + 4661713-4661901,4661907-4662155,4662307-4662336
Length = 155
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 108 PTGPQPRPRHGHRAVAIKXLMIVFGGGNEGI 200
P PQP P G AVA+ GGG EG+
Sbjct: 54 PPAPQPHPLVGGAAVAVAGGGADGGGGEEGV 84
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 435 GGRPCFGGSGFKRFHSHLEACNSYKS 358
GG PC G SGF RF H + K+
Sbjct: 632 GGPPCQGISGFNRFRKHNDPLEDEKN 657
>02_05_1268 -
35345283-35345462,35345577-35345636,35345719-35346042,
35346266-35346349,35346784-35346872,35346959-35347073,
35347534-35347660,35347743-35347882,35348010-35348071,
35348769-35348838,35348947-35349066,35349155-35349232,
35349738-35349968,35350110-35350220
Length = 596
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 260 GEVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLY--ELQASRWE 391
G+VP + G+RL++FGG + NDL+ +L+ WE
Sbjct: 221 GKVPISRGGQSVSLVGSRLIMFGGEDNKRRLLNDLHILDLETMMWE 266
>10_08_0847 +
21006842-21007042,21007173-21007261,21012226-21012429,
21016334-21016568,21016760-21016952,21017472-21017503,
21019172-21019236,21020766-21020985,21021172-21021370,
21021728-21021768,21023366-21023404,21023699-21023734,
21023767-21023798,21024264-21024426,21024602-21024653,
21024699-21024794,21024911-21025023,21026536-21026615,
21027343-21027577,21027765-21027890,21027994-21028092
Length = 849
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 269 GLLLLDWYEPLISGGIEDMQFVNDSFVSAAENYHQXFYGDRAMAMAGSRLRAGRIVHFLP 90
GL LLD Y+P ++ Q + D+FV+A + + F + RLR L
Sbjct: 171 GLQLLDNYDPTRPSRFKNAQEMRDAFVAACQRDAKPFAEKWRLPEDLERLRRQDHCKMLK 230
Query: 89 LKYRVF 72
+ RV+
Sbjct: 231 IALRVY 236
>10_08_0608 + 19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 59 SENEGKRGT*VAKSVQSYRPSTATPPWPSRG 151
++++G + SV SYRP+ + WP RG
Sbjct: 980 AQHQGDYSCTIPSSVVSYRPAGSHDEWPPRG 1010
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 435 GGRPCFGGSGFKRFHSHLEACNSYKSFEYLPY 340
GG PC G SGF RF + E K+ + + +
Sbjct: 487 GGPPCQGISGFNRFRNRKEPLKDEKNKQMVTF 518
>04_04_0224 -
23738105-23738273,23738364-23738472,23738702-23738804,
23738895-23738926,23739342-23739592,23739639-23739754,
23740271-23740526,23740760-23740847,23740985-23741062,
23741238-23741313,23741532-23741590,23742639-23742711
Length = 469
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 225 TTTNQWFVPVQKEKSHQDALPTASW*TVRAC*FLAAW*STASIQMICTNYKPL 383
T + WFVP + KS+ DA RA F+ W ++ +C PL
Sbjct: 220 TLVSNWFVPFSRSKSNIDA-------ARRALDFMLGWQKAQTMNSLCRFMDPL 265
>01_07_0361 -
43058132-43058164,43058309-43058374,43058712-43058794,
43058902-43059014,43059311-43059428,43059935-43060040,
43060128-43060205,43060322-43060372,43060461-43060521,
43060991-43061115,43061671-43061760,43061886-43061965,
43062060-43062489
Length = 477
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Frame = +3
Query: 117 PQPRPRHGHRAVAIKXLMIVFGGGNEGIV---------HELHVFNTTTNQWFVPVQ 257
P P P +GHR + L +V G +G V H L F +N+W + ++
Sbjct: 45 PSPSPSYGHRLPTLVDLTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLE 100
>10_01_0037 + 434995-436299
Length = 434
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 235 LVVVLKTCSS*TIPSFPPPKTIIKXFMATA 146
LV +T S+ IPS PPP+ I+ +A A
Sbjct: 45 LVAFFRTSSTGNIPSAPPPEMTIRRAIAEA 74
>06_03_1234 - 28586365-28587973,28590411-28590694
Length = 630
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 105 NPTGPQPRPRHGHRAVAIK-XLMIVFGGGNEGI 200
NP G P PR H AV++ +++FGG G+
Sbjct: 528 NPAGAGPPPRLDHVAVSLPGGRVLIFGGSVAGL 560
>05_04_0390 - 20856510-20856520,20856827-20857049
Length = 77
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 296 VVDGTRLLVFGGMVEYGKYSNDLYEL 373
+V+GTR+++F G + Y + + ++ EL
Sbjct: 52 IVNGTRVMLFSGEIHYARSTPEVQEL 77
>04_03_0680 - 18613901-18614528,18614766-18615265
Length = 375
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Frame = +2
Query: 272 PGCAAYGF---VVDGTRLLVFGGMVEYGK--YSNDLYELQA--SRW 388
PG GF V+DG L++ G V+YGK S+++Y+ A +RW
Sbjct: 123 PGLTKAGFSVVVLDGKLLVMAGYGVDYGKECVSDEVYQYDARLNRW 168
>08_02_0732 +
20521459-20522323,20522404-20522480,20523251-20523296,
20523482-20523713,20524244-20524439
Length = 471
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 474 PLRSVKL*PSRGQGGRPCFGGSGFKRFHSHLEACNSYKS 358
P+R V + G GG P GG G H H N Y S
Sbjct: 117 PIRGVPVYSGGGGGGHPFLGGGGGD--HRHNRLYNPYHS 153
>02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404
Length = 635
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 105 NPTGPQPRPRHGHRAVAIK-XLMIVFGGGNEGI 200
NP G P PR H AV++ +++FGG G+
Sbjct: 521 NPAGVGPPPRLDHVAVSLPGGRILIFGGSVAGL 553
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,417,722
Number of Sequences: 37544
Number of extensions: 362138
Number of successful extensions: 1053
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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