Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00346
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   6.5  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.7  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    23   8.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +3

Query: 129 PRHGHRAVAIKXLMIVFGGGNEGIVHELHVFNTTTN 236
           PRHGH + A       F GG     H  H  N TT+
Sbjct: 508 PRHGHESRANNFRRKRFAGGG----HSHHRSNDTTD 539


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 354 EYLPYSTMPPKTNRRVPSTTKP*AAHPGGTSPF 256
           + LP  T P   +R +P  + P    PGG  PF
Sbjct: 54  DILPILTGP---DRPIPGRSHPAEPAPGGNGPF 83


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 475 ESIPVCGLANETTIQKIHTEI 537
           E++  CG  N+ T   I TE+
Sbjct: 214 EALQACGTCNQITCSGISTEV 234


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 287 YGFVVDGTRLLVFGGMVEYGKYSNDLYELQ 376
           YGF   G  LLV   +V++       YE++
Sbjct: 83  YGFSASGLNLLVAALVVQWAIIMRGCYEME 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,867
Number of Sequences: 2352
Number of extensions: 12372
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)