Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00345
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027990-1|AAH27990.1| 770|Homo sapiens tetratricopeptide repea... 50 1e-05
AY358762-1|AAQ89122.1| 653|Homo sapiens DRDL5813 protein. 50 1e-05
AL833086-1|CAD89930.1| 462|Homo sapiens hypothetical protein pr... 50 1e-05
AK074095-1|BAB84921.1| 454|Homo sapiens FLJ00166 protein protein. 50 1e-05
AK055984-1|BAB71064.1| 770|Homo sapiens protein ( Homo sapiens ... 50 1e-05
AB075860-1|BAB85566.2| 660|Homo sapiens KIAA1980 protein protein. 49 2e-05
>BC027990-1|AAH27990.1| 770|Homo sapiens tetratricopeptide repeat
domain 14 protein.
Length = 770
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 13 EDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTS 192
ED+ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 95 EDH-YAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIM 153
Query: 193 RYVADINVKAFLPVGNI 243
R +A + + A P+ ++
Sbjct: 154 RDIAHLEITALCPLRDV 170
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 515 IQFLSEHLGIANMHCTNFSYLRG----RFASSEYADELRQAQASKWAFRSVAEGIEHFKA 682
++FL E LGI + S +RG F+ ++A LR+ Q++ WA + V G+++FK
Sbjct: 263 VEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKV 320
Query: 683 GRHSEAFQCLNK 718
GRH +A NK
Sbjct: 321 GRHVDAMNEYNK 332
>AY358762-1|AAQ89122.1| 653|Homo sapiens DRDL5813 protein.
Length = 653
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 13 EDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTS 192
ED+ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 95 EDH-YAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIM 153
Query: 193 RYVADINVKAFLPVGNI 243
R +A + + A P+ ++
Sbjct: 154 RDIAHLEITALCPLRDV 170
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 515 IQFLSEHLGIANMHCTNFSYLRG----RFASSEYADELRQAQASKWAFRSVAEGIEHFKA 682
++FL E LGI + S +RG F+ ++A LR+ Q++ WA + V G+++FK
Sbjct: 263 VEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKV 320
Query: 683 GRHSEAFQCLNK 718
GRH +A NK
Sbjct: 321 GRHVDAMNEYNK 332
>AL833086-1|CAD89930.1| 462|Homo sapiens hypothetical protein
protein.
Length = 462
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 13 EDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTS 192
ED+ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 118 EDH-YAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIM 176
Query: 193 RYVADINVKAFLPVGNI 243
R +A + + A P+ ++
Sbjct: 177 RDIAHLEITALCPLRDV 193
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 515 IQFLSEHLGIANMHCTNFSYLRG----RFASSEYADELRQAQASKWAFRSVAEGIEHFKA 682
++FL E LGI + S +RG F+ ++A LR+ Q++ WA + V G+++FK
Sbjct: 286 VEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKV 343
Query: 683 GRHSEAFQCLNK 718
GRH +A NK
Sbjct: 344 GRHVDAMNEYNK 355
>AK074095-1|BAB84921.1| 454|Homo sapiens FLJ00166 protein protein.
Length = 454
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 13 EDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTS 192
ED+ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 110 EDH-YAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIM 168
Query: 193 RYVADINVKAFLPVGNI 243
R +A + + A P+ ++
Sbjct: 169 RDIAHLEITALCPLRDV 185
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 515 IQFLSEHLGIANMHCTNFSYLRG----RFASSEYADELRQAQASKWAFRSVAEGIEHFKA 682
++FL E LGI + S +RG F+ ++A LR+ Q++ WA + V G+++FK
Sbjct: 278 VEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKV 335
Query: 683 GRHSEAFQCLNK 718
GRH +A NK
Sbjct: 336 GRHVDAMNEYNK 347
>AK055984-1|BAB71064.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ31422 fis, clone NT2NE2000384, weakly similar to
MICRONUCLEAR LINKER HISTONE POLYPROTEIN. ).
Length = 770
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 13 EDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTS 192
ED+ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 95 EDH-YAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIM 153
Query: 193 RYVADINVKAFLPVGNI 243
R +A + + A P+ ++
Sbjct: 154 RDIAHLEITALCPLRDV 170
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 515 IQFLSEHLGIANMHCTNFSYLRG----RFASSEYADELRQAQASKWAFRSVAEGIEHFKA 682
++FL E LGI + S +RG F+ ++A LR+ Q++ WA + V G+++FK
Sbjct: 263 VEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKV 320
Query: 683 GRHSEAFQCLNK 718
GRH +A NK
Sbjct: 321 GRHVDAMNEYNK 332
>AB075860-1|BAB85566.2| 660|Homo sapiens KIAA1980 protein protein.
Length = 660
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 515 IQFLSEHLGIANMHCTNFSYLRG----RFASSEYADELRQAQASKWAFRSVAEGIEHFKA 682
++FL E LGI + S +RG F+ ++A LR+ Q++ WA + V G+++FK
Sbjct: 153 VEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKV 210
Query: 683 GRHSEAFQCLNK 718
GRH +A NK
Sbjct: 211 GRHVDAMNEYNK 222
Score = 31.9 bits (69), Expect = 2.4
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +1
Query: 88 FFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTSRYVADINVKAFLPVGNI 243
FF +++ G+++IG + + G + ++C R +A + + A P+ ++
Sbjct: 9 FFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDV 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,400,514
Number of Sequences: 237096
Number of extensions: 2104667
Number of successful extensions: 7815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7815
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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