Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00345
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    78   1e-14
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    78   1e-14
AY060627-1|AAL28175.1|  390|Drosophila melanogaster GH04687p pro...    29   4.8  
AE013599-1544|AAF58481.1|  390|Drosophila melanogaster CG33671-P...    29   4.8  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 37/57 (64%), Positives = 42/57 (73%)
 Frame = +2

Query: 548 NMHCTNFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNK 718
           N + +  SYLR  F   E A ELRQ QAS+WAFRSVA+GIEHFK G+  EAFQCLNK
Sbjct: 271 NENLSLMSYLRAGFPEEENAAELRQKQASQWAFRSVADGIEHFKNGQQVEAFQCLNK 327



 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = +1

Query: 1   TLVPEDNLYAL-MPPFETFLNV-DKTARLRHFFDNVKTGELIIGAVINRTASG--MMLKV 168
           +L+ + N Y   M PFE FLNV DK     H    +K G++I   V  R ASG  +++K 
Sbjct: 85  SLLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSALKQGDIIYTQV-TRLASGNRLIVKP 143

Query: 169 LCTAGPTSRYVADINVKAFL 228
           LCTA P   Y+ADI +KA +
Sbjct: 144 LCTAEPKHAYLADIPIKAVI 163



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
 Frame = +3

Query: 255 DKKNVSRNYLMNDTVCCEVIEVIPDTDKMVCGMKGVTRXXXXXXXXXXXXXXSTDDFPLI 434
           DK+   R+++ ND + CE+  +  DT+++   M G+                   + P  
Sbjct: 174 DKQGNPRSFVQNDILRCEINNISADTERLSLNMIGM----FNKVPDLKFGLCDFKELPKY 229

Query: 435 YKKTMDM---KGENYEAILEKSPGFNNP 509
           Y K  ++      +YE  L K+  F NP
Sbjct: 230 YSKIHNLDHPSASHYEDELNKALEFENP 257


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 37/57 (64%), Positives = 42/57 (73%)
 Frame = +2

Query: 548 NMHCTNFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNK 718
           N + +  SYLR  F   E A ELRQ QAS+WAFRSVA+GIEHFK G+  EAFQCLNK
Sbjct: 271 NENLSLMSYLRAGFPEEENAAELRQKQASQWAFRSVADGIEHFKNGQQVEAFQCLNK 327



 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = +1

Query: 1   TLVPEDNLYAL-MPPFETFLNV-DKTARLRHFFDNVKTGELIIGAVINRTASG--MMLKV 168
           +L+ + N Y   M PFE FLNV DK     H    +K G++I   V  R ASG  +++K 
Sbjct: 85  SLLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSALKQGDIIYTQV-TRLASGNRLIVKP 143

Query: 169 LCTAGPTSRYVADINVKAFL 228
           LCTA P   Y+ADI +KA +
Sbjct: 144 LCTAEPKHAYLADIPIKAVI 163



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
 Frame = +3

Query: 255 DKKNVSRNYLMNDTVCCEVIEVIPDTDKMVCGMKGVTRXXXXXXXXXXXXXXSTDDFPLI 434
           DK+   R+++ ND + CE+  +  DT+++   M G+                   + P  
Sbjct: 174 DKQGNPRSFVQNDILRCEINNISADTERLSLNMIGM----FNKVPDLKFGLCDFKELPKY 229

Query: 435 YKKTMDM---KGENYEAILEKSPGFNNP 509
           Y K  ++      +YE  L K+  F NP
Sbjct: 230 YSKIHNLDHPSASHYEDELNKALEFENP 257


>AY060627-1|AAL28175.1|  390|Drosophila melanogaster GH04687p
           protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +2

Query: 560 TNFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEH 673
           T F  L G F    Y  E  QA  S WA+ S  E + H
Sbjct: 165 TTFLILAGHFDRDSYLSEANQALISSWAYES--ERVNH 200


>AE013599-1544|AAF58481.1|  390|Drosophila melanogaster CG33671-PA,
           isoform A protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +2

Query: 560 TNFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEH 673
           T F  L G F    Y  E  QA  S WA+ S  E + H
Sbjct: 165 TTFLILAGHFDRDSYLSEANQALISSWAYES--ERVNH 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,106,536
Number of Sequences: 53049
Number of extensions: 632187
Number of successful extensions: 1385
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)