Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00344
(365 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.32
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.32
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.32
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.32
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 1.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 5.2
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 5.2
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 20 6.9
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 6.9
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 20 6.9
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.32
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 10 DERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVVYLHATT 174
DE+ S +I S + LN+ + H +T + SG S S S+ +L A T
Sbjct: 1129 DEKASLINIADSLEMLNKRLDHIEKT-IDPSGHISRRRSMSASSRGDHHHLGAVT 1182
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.32
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 10 DERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVVYLHATT 174
DE+ S +I S + LN+ + H +T + SG S S S+ +L A T
Sbjct: 1129 DEKASLINIADSLEMLNKRLDHIEKT-IDPSGHISRRRSMSASSRGDHHHLGAVT 1182
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.32
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 10 DERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVVYLHATT 174
DE+ S +I S + LN+ + H +T + SG S S S+ +L A T
Sbjct: 1129 DEKASLINIADSLEMLNKRLDHIEKT-IDPSGHISRRRSMSASSRGDHHHLGAVT 1182
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.32
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 10 DERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVVYLHATT 174
DE+ S +I S + LN+ + H +T + SG S S S+ +L A T
Sbjct: 1129 DEKASLINIADSLEMLNKRLDHIEKT-IDPSGHISRRRSMSASSRGDHHHLGAVT 1182
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 1.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 193 GLEYHPLLLHVDKQRCV 143
G EYHP ++ + + +CV
Sbjct: 858 GSEYHPSIVSLGEYKCV 874
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 5.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 131 VTNHNAALFIYMQQQWVIFQT 193
VT + +LFI + +W++ T
Sbjct: 686 VTTYTTSLFINVPPRWILEPT 706
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 135 PITTQRCLSTCNNSG*YSRPRSNITQSFKR 224
P+ + S CNN+ Y N S+K+
Sbjct: 56 PLPSLFPFSPCNNTANYKSEAQNQPSSYKQ 85
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 20.2 bits (40), Expect = 6.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1
Query: 287 DRETFCGAADLIFEE 243
D +TFCG D ++ +
Sbjct: 621 DGDTFCGIKDKLYPD 635
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.2 bits (40), Expect = 6.9
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 216 FKRRRFIYQLFKYQVRSTTKSFSIFAPWPRSIIASIRRPLCTQTKEIK 359
F+R+R +YQ K F R I LC ++IK
Sbjct: 240 FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 287
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.2 bits (40), Expect = 6.9
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 216 FKRRRFIYQLFKYQVRSTTKSFSIFAPWPRSIIASIRRPLCTQTKEIK 359
F+R+R +YQ K F R I LC ++IK
Sbjct: 242 FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 289
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.312 0.126 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,302
Number of Sequences: 336
Number of extensions: 1376
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7510735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
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