Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00344
         (365 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   0.89 
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   2.0  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   2.0  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    24   2.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   8.3  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 82  RTPVTNSGESSTEGDSSHQS 141
           +TP+ N+G+    GDS+H S
Sbjct: 691 QTPIPNNGDVHQGGDSNHTS 710


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
 Frame = +2

Query: 155 FIYMQQQWVIFQTPVEYHAIVQETTFHLSTLQ-----ISSPQHH---KKFLYLRPMAPKH 310
           ++++  Q +IF   +E    +  + +++  L+     I++ + H   KKFL+ +  AP H
Sbjct: 75  YVFLDSQGIIFIDYIEKGKTIN-SEYYIKLLERLKDEIATKRPHLKKKKFLFHQDNAPCH 133

Query: 311 YSVNT 325
            SV T
Sbjct: 134 KSVKT 138


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
 Frame = +2

Query: 155 FIYMQQQWVIFQTPVEYHAIVQETTFHLSTLQ-----ISSPQHH---KKFLYLRPMAPKH 310
           ++++  Q +IF   +E    +  + +++  L+     I++ + H   KKFL+ +  AP H
Sbjct: 75  YVFLDSQGIIFIDYIEKGKTIN-SEYYIKLLERLKDEIATKRPHLKKKKFLFHQDNAPCH 133

Query: 311 YSVNT 325
            SV T
Sbjct: 134 KSVKT 138


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 37  RSSKQELNRDMKHRRRTPVTNSGESSTEG 123
           R SK     +++ +RR    N G+SST+G
Sbjct: 71  RQSKHLDLNELERKRRATEGNGGKSSTKG 99


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 97  NSGESSTEGDSSHQSQRSVV 156
           NSG ++  G  +HQ Q S V
Sbjct: 71  NSGNNNNNGVGNHQQQPSPV 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.126    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,727
Number of Sequences: 2352
Number of extensions: 6564
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)