Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00344
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 34 0.027
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 34 0.027
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 34 0.027
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 30 0.58
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 30 0.58
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 29 0.77
Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 28 2.4
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical p... 27 4.1
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 27 4.1
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 27 4.1
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 27 4.1
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 27 4.1
AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical ... 27 4.1
AC006722-17|ABP57812.1| 141|Caenorhabditis elegans Hypothetical... 27 4.1
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 27 5.4
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81139-5|CAB03481.2| 359|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 26 9.5
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 26 9.5
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 4 TSDERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSS 132
+S SSS S KQE D K R+R + +S ESST G ++
Sbjct: 191 SSSRTSSSSSTSSMKQEETADEKSRKRKLIMSSDESSTTGSTA 233
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 4 TSDERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSS 132
+S SSS S KQE D K R+R + +S ESST G ++
Sbjct: 962 SSSRTSSSSSTSSMKQEETADEKSRKRKLIMSSDESSTTGSTA 1004
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 4 TSDERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSS 132
+S SSS S KQE D K R+R + +S ESST G ++
Sbjct: 959 SSSRTSSSSSTSSMKQEETADEKSRKRKLIMSSDESSTTGSTA 1001
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 29.9 bits (64), Expect = 0.58
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 88 ESFVYVSCPCSILAYCFLYQTSCLF 14
E F Y S P + L+Y F + SCLF
Sbjct: 625 EVFTYTSIPATFLSYIFAFFWSCLF 649
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 29.9 bits (64), Expect = 0.58
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
F+Y+S P ++L++ F + SCLF
Sbjct: 609 FLYISIPATVLSFVFAFFWSCLF 631
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.5 bits (63), Expect = 0.77
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 TSDERGSSSDIRSSKQELNRDMKHRRRTPVT-NSGESSTEGDSSHQS 141
+SD+ SSD S + D K ++++ + N G SS DSS S
Sbjct: 137 SSDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDS 183
>Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical
protein T28B11.1 protein.
Length = 573
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 7 SDERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVVYLHATTVGDI 186
+D SSS ++ +Q+ R+ + RRR + SS+ DSS ++ +L + D
Sbjct: 120 ADSVSSSSKTKTKQQQTEREKELRRRNISDRTKSSSSSTDSSGIHSKATSFL-SDQYTDT 178
Query: 187 PDP 195
DP
Sbjct: 179 TDP 181
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
F+Y + P ++L+Y F + SCLF
Sbjct: 628 FMYYAVPTTVLSYIFAFFWSCLF 650
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
F+Y + P ++L+Y F + SCLF
Sbjct: 643 FMYYAVPTTLLSYIFAFFWSCLF 665
>Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 720
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
F+Y + P ++L+Y F + SCLF
Sbjct: 635 FMYYAVPTTLLSYIFAFFWSCLF 657
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
F+Y + P ++L+Y F + SCLF
Sbjct: 643 FMYYAVPTTLLSYIFAFFWSCLF 665
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
++Y + P +I+AY F + SCLF
Sbjct: 638 WIYYAVPVTIIAYIFAFFWSCLF 660
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 61 RDMKHRRRTPVTNSG-ESSTEGDSSHQSQRSVVYLHATTVGDIPD 192
RD+ RR P N+ SS++ DS H+ SV + G D
Sbjct: 423 RDVNKTRRAPQYNANRSSSSDSDSEHEEAASVATGEVSETGGTDD 467
>Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical
protein C06B3.2 protein.
Length = 665
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
+VY P +IL Y F + SCLF
Sbjct: 637 YVYYILPATILTYIFAFFWSCLF 659
>Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLFRRS 5
+ Y + P +IL+Y F + SCLF S
Sbjct: 527 YCYYAIPATILSYFFAFFWSCLFEVS 552
>Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLFRRS 5
+ Y + P +IL+Y F + SCLF S
Sbjct: 527 YCYYAIPATILSYFFAFFWSCLFEVS 552
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 34 IRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVVYLHATTVGDI 186
+ S+++ +N + TP TN+ E++TE +S S S V + T+ D+
Sbjct: 225 VESTQETVNAETNTPVDTPATNNVEATTEA-ASRPSLSSTVASNMTSADDL 274
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 155 FIYMQQQWVIFQTPVEYHAIVQETTFHLSTLQISSPQHHKKFLYLRPMAPKHYSVNTTSI 334
F Y QWV +P + F ++ SSPQ LY++ + P + + + I
Sbjct: 1239 FKYKSGQWVTVSSPSISCTFNESHAFSIA----SSPQDENMKLYIKAVGPWTWKLRSELI 1294
Query: 335 MHTNQGN 355
N G+
Sbjct: 1295 RSLNTGS 1301
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 27.1 bits (57), Expect = 4.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 82 FVYVSCPCSILAYCFLYQTSCLF 14
F Y++ P ++L+Y + SCLF
Sbjct: 615 FTYIAIPATLLSYVLAFFWSCLF 637
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
protein 3 protein.
Length = 1497
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 155 FIYMQQQWVIFQTPVEYHAIVQETTFHLSTLQISSPQHHKKFLYLRPMAPKHYSVNTTSI 334
F Y QWV +P + F ++ SSPQ LY++ + P + + + I
Sbjct: 1239 FKYKSGQWVTVSSPSISCTFNESHAFSIA----SSPQDENMKLYIKAVGPWTWKLRSELI 1294
Query: 335 MHTNQGN 355
N G+
Sbjct: 1295 RSLNTGS 1301
>AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical
protein Y45G12C.8 protein.
Length = 287
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 234 IYQLF-KYQVRSTTKSFSIFAPWPRSIIASIRRPL 335
IY L Y+V TK+ + WP S ASIR L
Sbjct: 64 IYNLSTSYRVNLITKNIAFLLVWPSSSTASIRSTL 98
>AC006722-17|ABP57812.1| 141|Caenorhabditis elegans Hypothetical
protein Y19D10A.17 protein.
Length = 141
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 234 IYQLF-KYQVRSTTKSFSIFAPWPRSIIASIRRPL 335
IY L Y+V TK+ + WP S ASIR L
Sbjct: 64 IYNLSTSYRVNLITKNIAFLLVWPSSSTASIRSTL 98
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 10 DERGSSSDIRSSKQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRSVV 156
+ R SS +++K E + H RR P S +STE +S ++ S++
Sbjct: 213 EPRRSSHQSKTAKSEEQKGHDHPRRVPPPTSPRASTE-ESFYERIHSIM 260
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +2
Query: 155 FIYMQQQWVIFQTPVEYHAIVQETTFHLSTLQISSPQHHKKFLYLRPMAPKHYSVNTTSI 334
F Y QW+ +P + F ++ SSPQ LY++ + P + + + I
Sbjct: 1245 FEYKSGQWITVSSPSISCTFNESHAFSIA----SSPQDENMKLYIKAVGPWTWKLRSELI 1300
Query: 335 MHTNQGN 355
N G+
Sbjct: 1301 RSLNTGS 1307
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 10 DERGSSSDIRSSKQE-----LNRDM--KHRRRTPVTNSGESSTEGDSSHQSQRSV 153
D+ G S +S KQ L R + K ++ T +G +EGDSS + R+V
Sbjct: 949 DQTGGSPGAQSQKQSNDQASLRRGLFKKKNEKSGGTTTGNDDSEGDSSPSTPRTV 1003
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 10 DERGSSSDIRSSKQE-----LNRDM--KHRRRTPVTNSGESSTEGDSSHQSQRSV 153
D+ G S +S KQ L R + K ++ T +G +EGDSS + R+V
Sbjct: 949 DQTGGSPGAQSQKQSNDQASLRRGLFKKKNEKSGGTTTGNDDSEGDSSPSTPRTV 1003
>Z81139-5|CAB03481.2| 359|Caenorhabditis elegans Hypothetical
protein W05H5.6 protein.
Length = 359
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 73 VSCPCSILAYCFLYQTSCLFRR 8
+SCP S+ AY F+ + + FRR
Sbjct: 202 ISCPISVAAYVFVKKVNESFRR 223
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 146 AALFIYMQQQWVIFQ--TPVEYHAIVQETTFHL 238
AALFIY Q WVI + + IV TT ++
Sbjct: 225 AALFIYFQPSWVIIDPICTLVFSVIVLCTTIYI 257
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 46 KQELNRDMKHRRRTPVTNSGESSTEGDSSHQSQRS 150
K++ R K + TP +S ESS++ S+ +S S
Sbjct: 197 KEQKARKKKEKTPTPTESSFESSSDSSSTSESSTS 231
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -3
Query: 123 PFRTTLSGVSY--WSPSSMFHVPVQ 55
P T SG + WS SS+FH P Q
Sbjct: 1671 PMFTMFSGPEFNLWSSSSLFHPPTQ 1695
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.126 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,753,436
Number of Sequences: 27780
Number of extensions: 145105
Number of successful extensions: 394
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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