Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00342
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   1.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.7  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 412 LKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNSRVGW 522
           +K  + + T     NL   L GPV   A   +SRVG+
Sbjct: 116 VKDVWQSATSGGGANLTNSLTGPVRPAACTPDSRVGY 152


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 574 LFLENFAFCVSNWVCTPASQPWSLVLLQRL 485
           +   +FA+  + W+CT   +   L L +RL
Sbjct: 81  ILFADFAYLETTWICTLLKKDKLLELFKRL 110


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 574 LFLENFAFCVSNWVCTPASQPWSLVLLQRL 485
           +   +FA+  + W+CT   +   L L +RL
Sbjct: 99  ILFADFAYLETTWICTLLKKDKLLELFKRL 128


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 361 VTLEGTFAPQTGTKTGKLKTSFTND 435
           + L+    P TG+K GK +++F  D
Sbjct: 676 ILLKNLQNPSTGSKPGKPRSAFLTD 700


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 380 KVPSRVTLRPAAILSWIVMSVANVLSVFH 294
           K+P   TLRP  +L  I++ V  ++   H
Sbjct: 46  KIPFYSTLRPINLLVQIILDVILLILNVH 74


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 380 KVPSRVTLRPAAILSWIVMSVANVLSVFH 294
           K+P   TLRP  +L  I++ V  ++   H
Sbjct: 46  KIPFYSTLRPINLLVQIILDVILLILNVH 74


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 380 KVPSRVTLRPAAILSWIVMSVANVLSVFH 294
           K+P   TLRP  +L  I++ V  ++   H
Sbjct: 366 KIPFYSTLRPINLLVQIILDVILLILNVH 394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,885
Number of Sequences: 336
Number of extensions: 3719
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)