Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00342
(728 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 104 3e-24
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 104 3e-24
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 104 3e-24
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 24 4.2
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 23 9.7
EF588455-1|ABQ96691.1| 177|Anopheles gambiae transposase protein. 23 9.7
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 9.7
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 23 9.7
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 104 bits (249), Expect = 3e-24
Identities = 41/91 (45%), Positives = 71/91 (78%)
Frame = +1
Query: 253 QFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 432
++ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P TG+KTG+ KT++++
Sbjct: 60 KYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSH 119
Query: 433 DTVAVNTNLDLDLAGPVVDVAAVLNSRVGWL 525
D V V+ + ++DL+GP+V+ + V + GWL
Sbjct: 120 DRVRVDADFNVDLSGPLVNASGVA-AYQGWL 149
Score = 100 bits (240), Expect = 4e-23
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = +3
Query: 510 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGV 689
QGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L+ V
Sbjct: 146 QGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRLETAV 205
Query: 690 SMKWTAGSADTLF 728
+ W +GS T F
Sbjct: 206 QLSWASGSNATKF 218
Score = 92.7 bits (220), Expect = 1e-20
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +2
Query: 77 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSN 256
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFGSL +
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60
Query: 257 LQ*K 268
+ K
Sbjct: 61 YKVK 64
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 104 bits (249), Expect = 3e-24
Identities = 41/91 (45%), Positives = 71/91 (78%)
Frame = +1
Query: 253 QFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 432
++ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P TG+KTG+ KT++++
Sbjct: 60 KYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSH 119
Query: 433 DTVAVNTNLDLDLAGPVVDVAAVLNSRVGWL 525
D V V+ + ++DL+GP+V+ + V + GWL
Sbjct: 120 DRVRVDADFNVDLSGPLVNASGVA-AYQGWL 149
Score = 100 bits (240), Expect = 4e-23
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = +3
Query: 510 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGV 689
QGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L+ V
Sbjct: 146 QGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRLETAV 205
Query: 690 SMKWTAGSADTLF 728
+ W +GS T F
Sbjct: 206 QLSWASGSNATKF 218
Score = 92.7 bits (220), Expect = 1e-20
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +2
Query: 77 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSN 256
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFGSL +
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60
Query: 257 LQ*K 268
+ K
Sbjct: 61 YKVK 64
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 104 bits (249), Expect = 3e-24
Identities = 41/91 (45%), Positives = 71/91 (78%)
Frame = +1
Query: 253 QFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 432
++ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P TG+KTG+ KT++++
Sbjct: 60 KYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSH 119
Query: 433 DTVAVNTNLDLDLAGPVVDVAAVLNSRVGWL 525
D V V+ + ++DL+GP+V+ + V + GWL
Sbjct: 120 DRVRVDADFNVDLSGPLVNASGVA-AYQGWL 149
Score = 100 bits (240), Expect = 4e-23
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = +3
Query: 510 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGV 689
QGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L+ V
Sbjct: 146 QGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRLETAV 205
Query: 690 SMKWTAGSADTLF 728
+ W +GS T F
Sbjct: 206 QLSWASGSNATKF 218
Score = 92.7 bits (220), Expect = 1e-20
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +2
Query: 77 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSN 256
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFGSL +
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60
Query: 257 LQ*K 268
+ K
Sbjct: 61 YKVK 64
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 24.2 bits (50), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 152 FKLDLKTKSESGVEFTSGITSNQ 220
F+LDL+ + ESG + +S IT+ +
Sbjct: 157 FQLDLQLQDESGGDISSFITNGE 179
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 23.0 bits (47), Expect = 9.7
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 510 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 653
+GW +G+ QF ++ + GYQ D V++G F S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653
>EF588455-1|ABQ96691.1| 177|Anopheles gambiae transposase protein.
Length = 177
Score = 23.0 bits (47), Expect = 9.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 581 SKVVLGELCFLCIKLGVYTSQPT 513
S V G CF C+K+ YT T
Sbjct: 17 SPVETGAKCFYCLKVFKYTKGTT 39
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.0 bits (47), Expect = 9.7
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -3
Query: 600 HQIGNLEQSCSWRTLLFVYQTGCVHQPANPG 508
H+ + + W ++F+Y C+ + + PG
Sbjct: 335 HRNADTHEMSDWVRVIFLYWLPCILRMSRPG 365
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 9.7
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 510 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 653
+GW +G+ QF ++ + GYQ D V++G F S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,025
Number of Sequences: 2352
Number of extensions: 15933
Number of successful extensions: 237
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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