Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00342
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AF043702-3|AAK21496.2| 474|Caenorhabditis elegans Hypothetical ... 30 1.5
U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 29 2.6
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 28 7.9
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 28 7.9
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/93 (39%), Positives = 58/93 (62%)
Frame = +1
Query: 250 LQFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFT 429
+++ + YG+T TEKWNT+N L T I + ++ GLKVTL+ +AP G ++GK+K +
Sbjct: 61 VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWA 120
Query: 430 NDTVAVNTNLDLDLAGPVVDVAAVLNSRVGWLV 528
T V ++ + A PV++ A V SR GWL+
Sbjct: 121 LPTARVTADVGVTSA-PVINAAGVF-SRDGWLI 151
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +2
Query: 77 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKS--ESGVEFTSGITSNQESGKVFGSL 247
MAPP +ADLGK A D+F+KGY+FG K+D T++ VEF S + N SGK+ G+L
Sbjct: 1 MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNL 59
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 513 GWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVS 692
GWL G FD+ K + + A G+ + + LH+ V N DFG S+Y KV+ ++ G
Sbjct: 148 GWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHKVASNVEVGTQ 207
Query: 693 MKWTAG 710
+ W G
Sbjct: 208 LGWKVG 213
>AF043702-3|AAK21496.2| 474|Caenorhabditis elegans Hypothetical
protein W03D8.1 protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 515 TLEFSTAATSTTGPAKSRSKLVFTAT 438
TL+ +TA+TST GP KS +K T T
Sbjct: 392 TLKTTTASTSTAGPTKSSTKTKTTVT 417
>U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical
protein F45F2.11 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 117 MMSSARAITLVFSNST*RPRASLVLNSPAGSPPTRKAERFLAA-FPPICSERLWLDFHRE 293
M++++ A++ + R + SP+ S R+A+RF A F P+ ++++ R
Sbjct: 26 MIAASNAVSFNAFDEVKRAAQAKTAKSPSTSSLERRAQRFCPADFQPLPPPHIYIEMIRT 85
Query: 294 VEHRQYI 314
+ QYI
Sbjct: 86 LAPHQYI 92
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 271 YGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND-TVAV 447
Y TFT W+T++T+ T QD + + T E T A + + T T + T +V
Sbjct: 460 YPSTFTSSWSTESTVLT-TQQQDTTTSVILETTEATDAASSSLSPDDVSTQLTTEATTSV 518
Query: 448 NTNLDLD 468
+++ D
Sbjct: 519 VSSVPPD 525
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 195 SPAGSPPTRKAERFLAAFPPICSERLWLDFHREVEHRQY 311
SP+ +PPT KA + + PP ++ + L+ V + QY
Sbjct: 304 SPSPAPPTPKASKSASFIPPPTADDMELESPPHVSNNQY 342
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 195 SPAGSPPTRKAERFLAAFPPICSERLWLDFHREVEHRQY 311
SP+ +PPT KA + + PP ++ + L+ V + QY
Sbjct: 304 SPSPAPPTPKASKSASFIPPPTADDMELESPPHVSNNQY 342
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 358 KVTLEGTFAPQTGTK-TGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNSRVGWLVYT 534
K + F P K GKL TSF+ND D++ PV++ L+ + +L
Sbjct: 344 KPEIRKKFEPMQKLKHAGKLDTSFSNDENRAAAGCDIEEDPPVIEKPTDLSGVLDFLDEE 403
Query: 535 PS 540
P+
Sbjct: 404 PA 405
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 358 KVTLEGTFAPQTGTK-TGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNSRVGWLVYT 534
K + F P K GKL TSF+ND D++ PV++ L+ + +L
Sbjct: 344 KPEIRKKFEPMQKLKHAGKLDTSFSNDENRAAAGCDIEEDPPVIEKPTDLSGVLDFLDEE 403
Query: 535 PS 540
P+
Sbjct: 404 PA 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,151,721
Number of Sequences: 27780
Number of extensions: 340461
Number of successful extensions: 931
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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