Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00340
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    34   0.004
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    26   1.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   3.5  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   4.6  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   6.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.1  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    23   8.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.1  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
 Frame = +1

Query: 475 ADPGQRMRS---GIAWSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKTMWKNECN 645
           +DP  R R+     A + +C  C C+   +G   + +  E ++EP    A +    N   
Sbjct: 501 SDPEYRERADECSNAGTYKCGICECDGTYHGQRCECSAMESLLEPGMVDACRM--SNASE 558

Query: 646 TCWCTSDGKPMCTRMECITNNTPEKSELIQGREC 747
            C     G+  C    C+    P   ELI GR C
Sbjct: 559 EC----SGRGQCVCGVCVCERRPNPDELIDGRYC 588



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 404 CLDNGLGLCSLDACRRSSTPKKFELIQGREC 496
           C   G  +C +  C R   P   ELI GR C
Sbjct: 560 CSGRGQCVCGVCVCERRPNPD--ELIDGRYC 588


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 649 CWCTSDGKPMCTRMECI-TNNTPEK 720
           CW ++D +  C+  EC+ T  TP +
Sbjct: 116 CWGSNDDQESCSSNECVSTTETPTR 140


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 139 VPGLHFRAPLSQCRAKTIKQIAIKHLISL 53
           V  +HFR+P +   A  ++ I I HL  L
Sbjct: 323 VLNIHFRSPQTHTMAPWVRTIFINHLPKL 351


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +1

Query: 652 WCTSDGKPMCTRMECITNNTPEKSELIQGRECAPGSTG 765
           WC++DG        C T  T    ++IQ +    G  G
Sbjct: 70  WCSTDGAHGLMLWFCRTARTKHVVDMIQAQRSPRGGPG 107


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 1   RHERWTSRVLNSV 39
           RH RWT RV+ SV
Sbjct: 952 RHTRWTHRVIPSV 964


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 395  CYNPSGRRCLADNAQVQ 345
            CY+PS R+C  +  Q +
Sbjct: 1447 CYSPSDRQCAEEREQAE 1463


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +2

Query: 419 LGLCSLDA-CRRSSTPKKFELIQGRECAPGSRGRTSVTVVGAMP 547
           +G+C+    C     P     + GR+     RG+    V+ +MP
Sbjct: 126 IGMCAFGIECNSMRNPDAEFRVMGRKIFSKPRGKVKSLVINSMP 169


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +2

Query: 260  ESNCHFCRCSDSGV--AECLRQDSCDQIIFTEPVRC 361
            E  CH C C  SG   ++C +   C      E  RC
Sbjct: 981  EDGCHACDCDPSGSKGSQCNQYGQCPCNDNVEGRRC 1016


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 946,505
Number of Sequences: 2352
Number of extensions: 22292
Number of successful extensions: 119
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)