Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00339
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.92 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 208 SFTFLGHYVQTHINKKEFKYIDN 140
           +F F G ++ ++INK  FK I N
Sbjct: 373 TFGFFGTHILSYINKASFKKIVN 395


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 138 LLSIYLNSFLLMCV 179
           +  +YL+SF+L+C+
Sbjct: 134 MFGLYLSSFILVCI 147


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 138 LLSIYLNSFLLMCV 179
           +  +YL+SF+L+C+
Sbjct: 134 MFGLYLSSFILVCI 147


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -3

Query: 220 TQYISFTFLGHYVQTHINKKEFKYIDNNSRLVNHCSQRNIHSIIGGL 80
           T  I++   G  +      +  +Y+  N  +V+H +   IH+  GGL
Sbjct: 442 TPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGL 488


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 497 LNMYFLFCGFVLIFEIVF 444
           L + F+FC F+ +F + +
Sbjct: 141 LQLVFVFCYFIYLFTVYY 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,860
Number of Sequences: 336
Number of extensions: 3700
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)