Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00335
(772 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 122 4e-28
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 119 2e-27
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 116 2e-26
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 107 1e-23
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 103 1e-22
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 91 7e-19
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 9e-19
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 91 1e-18
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 91 1e-18
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 90 2e-18
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 90 2e-18
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 4e-16
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 82 6e-16
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 79 4e-15
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 79 4e-15
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 77 1e-14
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 75 6e-14
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 73 3e-13
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 71 1e-12
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 71 1e-12
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 68 7e-12
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 67 1e-11
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 66 3e-11
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 62 4e-10
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 62 5e-10
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 61 8e-10
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 61 1e-09
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 56 4e-08
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 54 2e-07
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 54 2e-07
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 53 2e-07
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 52 7e-07
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 50 3e-06
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 49 5e-06
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 49 5e-06
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 48 6e-06
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 48 6e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 48 6e-06
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 48 8e-06
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 46 3e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 45 6e-05
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 45 6e-05
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 44 1e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 44 1e-04
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 42 6e-04
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 42 7e-04
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 41 0.001
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 41 0.001
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 41 0.001
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 41 0.001
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 38 0.007
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 38 0.009
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 37 0.016
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 37 0.016
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 37 0.021
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 36 0.027
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 36 0.036
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 36 0.048
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 35 0.063
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 35 0.084
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 35 0.084
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 34 0.11
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 33 0.19
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 33 0.19
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 32 0.59
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 31 1.0
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_51986| Best HMM Match : HLH (HMM E-Value=0.15) 30 2.4
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 29 3.1
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 29 4.2
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 29 5.5
SB_20875| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 28 7.3
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_14584| Best HMM Match : IBV_3C (HMM E-Value=4.1) 28 9.6
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_2307| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 122 bits (293), Expect = 4e-28
Identities = 52/91 (57%), Positives = 72/91 (79%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MGIMLVYDVTNEKSF NI W++ I+++A+ DV++M++GNKCD+ +R +S+
Sbjct: 22 TTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQ 81
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHFTL 528
+GEQLA Y I F+ETSA ++NV F +
Sbjct: 82 TKGEQLASSYGISFIETSALSNINVEKSFVV 112
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 197 GKKVKLQIWDTAGQERFRT 253
GKK+KLQIWDTAGQERF T
Sbjct: 2 GKKIKLQIWDTAGQERFHT 20
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 119 bits (287), Expect = 2e-27
Identities = 52/80 (65%), Positives = 68/80 (85%)
Frame = +1
Query: 283 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIE 462
GIMLVYD+T EK+F+NI W+RNIEE+A+ DVEKMILGNKCD+D +R VS+ERGEQ+A E
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIARE 186
Query: 463 YQIKFVETSAKDSLNVNMHF 522
+ I+F+ETSAK ++N+ F
Sbjct: 187 HGIRFLETSAKTNINIEQAF 206
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTI 160
K+YD LFKLLLIGDSGVGKT ILFRFS+DAFN +FISTI
Sbjct: 4 KSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 116 bits (279), Expect = 2e-26
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
M YD LFKLLLIGDSGVGK+S+L RF++D F+ ++ISTIG+DFKIRT+ +DGK +KLQ
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Query: 218 IWDTAGQERFRT 253
IWDTAGQERFRT
Sbjct: 61 IWDTAGQERFRT 72
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/89 (43%), Positives = 55/89 (61%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYR + GI+L+YDV ++F ++ W+ + E A V +++GNKCDL RQV
Sbjct: 74 TTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGY 133
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
++ A + I F+ETSAKDS NV F
Sbjct: 134 NTAKEFAEKLDISFIETSAKDSTNVESVF 162
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 107 bits (256), Expect = 1e-23
Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Frame = +1
Query: 235 SREIPYKTTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 414
S+EIP Y GIMLVYD+TN+KSFE +NWIRNIEE+AS DVEKM+LGNKCD++
Sbjct: 73 SKEIP--ADIIYEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDME 130
Query: 415 SQRQVSKERGEQ---LAIEYQIKF 477
+RQVSKERGEQ L + Y++ F
Sbjct: 131 DRRQVSKERGEQGDLLFLMYKVPF 154
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 103 bits (248), Expect = 1e-22
Identities = 43/70 (61%), Positives = 61/70 (87%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ +D +FKLL+IG+S VGKTS LFR+++D+F +F+ST+GIDFK++T+ + K+VKLQIW
Sbjct: 16 QNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIW 75
Query: 224 DTAGQERFRT 253
DTAGQER+RT
Sbjct: 76 DTAGQERYRT 85
Score = 46.4 bits (105), Expect = 3e-05
Identities = 17/28 (60%), Positives = 26/28 (92%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKN 339
TTAYYRG+MG +L+YD+TNE+SF+ +++
Sbjct: 87 TTAYYRGAMGFILMYDITNEESFQAVQD 114
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 96.3 bits (229), Expect = 2e-20
Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 21/93 (22%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFS---------------------EDAFNISFIS 154
M YD LFKLLLIGDSGVGK+ +L RF+ +D + S+IS
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYIS 60
Query: 155 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 253
TIG+DFKIRTI+LDGK +KLQIWDTAGQERFRT
Sbjct: 61 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 93
Score = 90.6 bits (215), Expect = 1e-18
Identities = 38/89 (42%), Positives = 63/89 (70%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T++YYRG+ GI++VYDVT+++SF N+K W++ I+ A +V K+++GNKCDL +++ V
Sbjct: 95 TSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDF 154
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
++ A + F+ETSAK++ NV F
Sbjct: 155 TTAKEYAESLGVPFLETSAKNATNVEQAF 183
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 91.5 bits (217), Expect = 7e-19
Identities = 39/67 (58%), Positives = 55/67 (82%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
YD L+K++LIGDSGVGK+S+L RF+ + F+I STIG++F R+I ++GK +K Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 230 AGQERFR 250
AGQER+R
Sbjct: 69 AGQERYR 75
Score = 81.4 bits (192), Expect = 7e-16
Identities = 32/82 (39%), Positives = 57/82 (69%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T+AYYRG++G +LVYD+T +K+F++++ W+ + E+A + M++GNKCDL R V+
Sbjct: 78 TSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVAS 137
Query: 436 ERGEQLAIEYQIKFVETSAKDS 501
+ ++ E+ + F+E SA D+
Sbjct: 138 DDAKKYGDEHGLAFIEASALDA 159
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 91.1 bits (216), Expect = 9e-19
Identities = 37/63 (58%), Positives = 53/63 (84%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K+L++G+SGVGK+S+L RF++D F+ +TIG+DFK++T+ ++G K KL IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 245 FRT 253
FRT
Sbjct: 70 FRT 72
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE-ENASADVEKMILGNKCDLDSQRQVS 432
T +YYRG+ G++LVYD + ++F+ ++ W+ +E + D+ KM++GNK D S S
Sbjct: 74 TPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS----S 129
Query: 433 KERGEQLAIEYQ 468
+ G++L +Y+
Sbjct: 130 SKCGQKLLGDYR 141
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 90.6 bits (215), Expect = 1e-18
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
D +FK+L++GD VGK+S++ RF +D FN +TIG+DF I DLDGKKVKLQ+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 233 GQERFR 250
G+E++R
Sbjct: 68 GEEKYR 73
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/88 (36%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQRQVSKE 438
+++RG+ G +LV+DV+ ++SF++I++ W+ + + +D +++GNKCD ++VS+E
Sbjct: 78 SFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD-KKDKKVSEE 136
Query: 439 RGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ L+ Y + ++ETSAKD+ NVN F
Sbjct: 137 DIQNLSSCYNLSWLETSAKDNTNVNEAF 164
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 90.6 bits (215), Expect = 1e-18
Identities = 55/159 (34%), Positives = 88/159 (55%)
Frame = +1
Query: 46 NLRLFIQITSNRRFGSGKNINTI*IF*RCI*HLLYIHNWYRL*NSNNRP*WQKS*ITNMG 225
++RL +Q +R FGS K +++ I R L ++ R N N+ W+ G
Sbjct: 324 SVRLLVQDLIDRGFGSRKILSSSSIRRRLPQRELPDYDRSRFQNKNDESGWEA------G 377
Query: 226 YCWSREIPYKTTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 405
R I T++YYRG+ G+M+VYD+T +S+ N+ W+ +E AS V +++GNK
Sbjct: 378 QERFRTI---TSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKI 434
Query: 406 DLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
DLD+ R+V + ++ A + + FVETSAK + NV F
Sbjct: 435 DLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAF 473
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 90.2 bits (214), Expect = 2e-18
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T+AYYRG+MG +LVYD+ SF N+ W+ + ++AS D+ +++GNK DL R +
Sbjct: 9 TSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIEN 68
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNV 510
RG+Q A E+ + F+ETSA DS NV
Sbjct: 69 RRGKQFAAEHGMLFMETSALDSTNV 93
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
Y LFK++L+GD+ VGKT ++ +F++ F + TIG+DF I+T+D+DG+KVKLQIWDT
Sbjct: 4 YSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDT 63
Query: 230 AGQERFRTKQQ 262
AGQERFR+ Q
Sbjct: 64 AGQERFRSITQ 74
Score = 58.4 bits (135), Expect = 6e-09
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 429
T +YY + G+++ YD+TN+KSFE++ W+ + S DV I+GNK DL + R+V
Sbjct: 73 TQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKV 130
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/74 (55%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
KT + +FK++ IGDSGVGK+S L RF D + SF +TIG+DF+I+T++++G+ + +Q+W
Sbjct: 891 KTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Query: 224 DTAGQERFR--TKQ 259
DTAGQERFR TKQ
Sbjct: 951 DTAGQERFRSITKQ 964
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL---DSQRQ 426
T Y+R + GI++ YDVT E SF N+K W+ ++EE A V KM+LGNK DL + R
Sbjct: 962 TKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRV 1021
Query: 427 VSKERGEQLAIEYQIKFVETSAKDSLNV 510
V G+ LA +Y ++ETSAK N+
Sbjct: 1022 VKTIDGKNLANQYDALYMETSAKTGNNI 1049
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +1
Query: 280 MGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAI 459
+GI+LVYD+T E SF++I W++NIE+NAS +V K++LGNK D + +R + +RG +
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 460 EYQIKFVETSAKDSLNVNMHF 522
+ ++F E SA+ NV F
Sbjct: 63 DNNLEFYEASARTGENVQQAF 83
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 81.8 bits (193), Expect = 6e-16
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
YD LFK++LIGDSGVGK+++L RF+ + FN+ STIG++F R+I +DGK +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 79.0 bits (186), Expect = 4e-15
Identities = 32/65 (49%), Positives = 50/65 (76%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 238
+FK++L GD+ VGK+S + R + F+ + ST+G+DF+++T+ +DGK LQ+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 239 ERFRT 253
ERFR+
Sbjct: 502 ERFRS 506
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL------DSQR 423
+Y+R + G++L+YDVT E SF ++++W+ IEE+ S V M+ GNK D+ +++
Sbjct: 510 SYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKT 569
Query: 424 QVSKERGEQLAIEYQIKFVETSAKDSLNV 510
++ E G +LA E+ F+ETS+K++ N+
Sbjct: 570 VITAESGSRLAKEHGALFIETSSKENKNI 598
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +2
Query: 35 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVK 211
+M Y F+++LIGDS VGK+S+L +F+E F + T+G+DF +R ++L G ++K
Sbjct: 5 RMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIK 64
Query: 212 LQIWDTAGQERFRT 253
LQIWDTAGQERFR+
Sbjct: 65 LQIWDTAGQERFRS 78
Score = 75.4 bits (177), Expect = 5e-14
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS-ADVEKMILGNKCDLDSQRQVS 432
T +YYR ++G +++YD+TN SF N+ +W + ++ A+V M++G+K D +S+R VS
Sbjct: 80 TYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVS 139
Query: 433 KERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
E GE A + + F+ETSAK N+ F
Sbjct: 140 TEEGECFAEAHNMMFIETSAKVLCNIEEAF 169
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FK+L++GD GVGKTS++ RF++ F + ST+G+D R +D+ G +VKLQ WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 242 RFR 250
+FR
Sbjct: 72 KFR 74
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/88 (34%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL-DSQRQVS 432
T +YYR + ++LV+D+TN +F +I W+ N+++ + ++ K+++GNK DL + R+V+
Sbjct: 77 TQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVN 136
Query: 433 KERGEQLAIEYQIKFVETSAKDSLNVNM 516
LA ++ ++ETSAK NV +
Sbjct: 137 TRSAANLAEFEELLYLETSAKWDDNVEV 164
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YYRG+ ++VYD+TN+ +F K W++ ++ AS ++ + GNK DL S+R V E
Sbjct: 90 YYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDA 149
Query: 445 EQLAIEYQIKFVETSAKDSLNVN 513
+ A + + F+ETSAK ++NVN
Sbjct: 150 QSYAEDNGLLFMETSAKTAMNVN 172
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 56 CLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 235
C FKL+L+G+S VGK+S++ RF + F+ STIG F +T+ LD VK +IWDTAG
Sbjct: 20 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG 79
Query: 236 QERFRT 253
QER+ +
Sbjct: 80 QERYHS 85
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K++ +GD GVGK+S+ RF D F + TIGIDF +T+ LD +V+LQIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 245 FR 250
FR
Sbjct: 225 FR 226
Score = 68.1 bits (159), Expect = 7e-12
Identities = 31/88 (35%), Positives = 52/88 (59%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 441
+Y R S ++V+D+TN SFE++ +W++ + + +I+GNK D +R+VS +
Sbjct: 231 SYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDV 290
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHFT 525
E+ A + +VETSAK NV + FT
Sbjct: 291 AEKSAERLGLSYVETSAKSGYNVKLLFT 318
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 74.9 bits (176), Expect = 6e-14
Identities = 33/85 (38%), Positives = 57/85 (67%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T+ YYRG+ G+++VYDVT+ +F N+K W+ I++N DV ++++GNK D S++ V
Sbjct: 43 TSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVET 101
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNV 510
++ + I+ ETSAK+++NV
Sbjct: 102 ADLQKFGEQMNIRVFETSAKENINV 126
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/40 (80%), Positives = 39/40 (97%)
Frame = +2
Query: 134 FNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 253
F+ S+I+TIG+DFKIRTI++DG+KVKLQIWDTAGQERFRT
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRT 41
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 74.5 bits (175), Expect = 8e-14
Identities = 33/63 (52%), Positives = 47/63 (74%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FK+++IGDS VGKT + +R F +TIG+DF ++++L+G+ VKLQ+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 242 RFR 250
RFR
Sbjct: 107 RFR 109
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA-SADVEKMILGNKCDLDSQRQVSKER 441
YYR ++ +YD+T + SFE + WI +A S DV K+++GNKCDL +R VS
Sbjct: 116 YYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNI 175
Query: 442 GEQLAIEYQIKFVETSAKD 498
+ A + + E S K+
Sbjct: 176 ARKFADSHNMPLWEISIKN 194
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/61 (49%), Positives = 49/61 (80%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
YD LFK++LIGDSGVGK+++L R++++ F++ +TIG++ R ++++GK V+ QIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 230 A 232
A
Sbjct: 75 A 75
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/89 (37%), Positives = 57/89 (64%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T +YYRG+ G +LVYD+++ ++F ++ NW+ + AS ++ +++GNK DLD+ R+V+
Sbjct: 161 TRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTF 220
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ A E ++ F+ETSA NV F
Sbjct: 221 LEASRFAQENELMFLETSALTGENVEEGF 249
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2
Query: 155 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 253
TIG++F + +++ GK VKLQIWDTAGQERFR+
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRS 159
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 11/76 (14%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTI-----------DLDGKK 205
L K L +GDSGVGKTS+L+++++ FN F+ TIGIDF+ + + G++
Sbjct: 106 LIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQR 165
Query: 206 VKLQIWDTAGQERFRT 253
+ LQ+WDTAGQERFR+
Sbjct: 166 IHLQLWDTAGQERFRS 181
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/37 (48%), Positives = 31/37 (83%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA 366
TTA++R +MG +LV+D+T+E+SF NI+NW+ ++ +A
Sbjct: 183 TTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 385 MILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNV 510
++LGNK DL+ R V + LA +K+ ETSA NV
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNV 511
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 238
LFK++L+G++GVGKTS+ +R E+ F +TIGID + + + K+V L +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 239 ERFRT 253
ERFRT
Sbjct: 71 ERFRT 75
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T YYRG+ +L+++V + S + + +WI + +E D K+++ NK DLD QV+
Sbjct: 77 TKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDE-FCPDALKVLVANKIDLD--EQVTT 133
Query: 436 ERGEQLAIEYQ 468
E E A ++
Sbjct: 134 ESVELFASSHE 144
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T +YYR G+++ YD+T +F+N+ W ++++ A + K+++GNK DL+ +R+VS
Sbjct: 112 TQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSL 171
Query: 436 ERGEQLAIEY-QIKFVETSAKDSLNVNMHF 522
E A Y + +ETSAKD+ N+ F
Sbjct: 172 EDAVNCASHYGMLDVLETSAKDATNIEAAF 201
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 206 VKLQIWDTAGQERFRTKQQ 262
VKLQIWDTAGQERFRT Q
Sbjct: 95 VKLQIWDTAGQERFRTITQ 113
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 68.1 bits (159), Expect = 7e-12
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T+AYYRG+MG +LVYD+ SF N+ W+ + ++AS D+ +++GNK DL R +
Sbjct: 9 TSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIEN 68
Query: 436 ERG 444
RG
Sbjct: 69 RRG 71
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/86 (37%), Positives = 46/86 (53%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YYR + +LVYD+T E +F +++ WIR ++ D+ + GNKCD QR V +
Sbjct: 29 YYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDA 88
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHF 522
+ A F ETSA S NV+ F
Sbjct: 89 QDFAGSVDAIFAETSALTSKNVHWLF 114
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 191 LDGKKVKLQIWDTAGQERFRT 253
++ K K IWDTAGQERF++
Sbjct: 4 VNDKAYKFNIWDTAGQERFKS 24
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 66.1 bits (154), Expect = 3e-11
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
+TA R GI+LVYD+T KSF+N++ W+ +I +N E +++GNKCD+ R+V K
Sbjct: 49 STAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVPK 108
Query: 436 ERGEQ 450
+GE+
Sbjct: 109 RKGEE 113
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +2
Query: 74 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 253
L D GVGK+S++ RF F+ TIG++F + + LDG+ LQIWDTAGQERF++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +1
Query: 259 TAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQ 426
T +YRGS +LVY V + KSF N+ W + A D + ++LGNK D++ R
Sbjct: 278 TPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RA 336
Query: 427 VSKERGEQLAIEYQ-IKFVETSAKDSLNVNMHF 522
VS+E + + + + ETSAKDS NVN F
Sbjct: 337 VSQEEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 62.5 bits (145), Expect = 4e-10
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YYRG++G +LVYD+ ++EN++ W++ + ++A +++ M++GNK DL R V +
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 445 EQLAIEYQI 471
+ A Y I
Sbjct: 62 KAFAEIYHI 70
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD--VEKMILGNKCDLDSQRQVSK 435
AY+RG G+ LV+D+T E +F + WI + AD ++ +++GNK D++ R V+
Sbjct: 420 AYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTY 479
Query: 436 ERGEQLAIEYQIKFVETSAKD 498
R ++ A ++ETSAKD
Sbjct: 480 SRAKEFAAMNGFPYIETSAKD 500
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 29 VVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFI-STIGI-DFKIRTIDLDGK 202
++ +D FK L+IG+SGVGK+ ++ + F++ F+ ST+ + D D K
Sbjct: 340 IISRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNK 399
Query: 203 KVKLQIWDTAGQERF 247
K+KL I DTAGQER+
Sbjct: 400 KIKLTIGDTAGQERY 414
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 61.3 bits (142), Expect = 8e-10
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKER 441
Y R G + V+ V N KSFE+I + I+ A+ M+L GNKCDL QR VS
Sbjct: 297 YMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDL-PQRTVSTSD 355
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
++LA Y I F ETSAK V+ F
Sbjct: 356 AQELAKSYNIPFQETSAKTRQGVDDAF 382
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 319 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 498
SF+ WI ++ DV M++GNK DL +RQV+ E GE+ A E + F+ETSAK
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 499 SLNVNMHF 522
NV F
Sbjct: 73 GYNVKQLF 80
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 5989
Query: 245 F 247
+
Sbjct: 5990 Y 5990
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 17 RNQIVVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTID-L 193
+ + ++M Y FK+L++GD GK S + R+ + ++ + TIG+DF ++TI
Sbjct: 4 KKAVPLQMLNQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWA 63
Query: 194 DGKKVKLQIWDTAGQERF 247
++LQIW AGQERF
Sbjct: 64 QNTTIRLQIWLIAGQERF 81
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = +1
Query: 370 ADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
A+ + +++GNKCD++ +R VS +RG+QLA + ++F ETSAKD+ NV F
Sbjct: 11 ANAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVF 61
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKER 441
Y R G +++Y +T+ SF + IE + D+ +++GNK DL+ +R+V+ +
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQE 64
Query: 442 GEQLAIEYQIKFVETSA 492
G++LA + F ETSA
Sbjct: 65 GQELAHRFDCPFFETSA 81
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNW---IRNIEENASADVEKMILGNKCDLDSQRQVSK 435
Y + G ++VY + ++FE K IR I++ + ++ GNKCDL R VS+
Sbjct: 190 YLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSR 249
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ + A E++ F ETSA +++N + F
Sbjct: 250 QEAREFAAEHECVFHETSAANNINTKVIF 278
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG-Q 238
+ L+L+G +GVGK+++L RF F + T+ + + + + +D L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTASTY 186
Query: 239 ERFRTKQQHTTVVLWELC-LSTMLRMRRALKTLR 337
E Q +V++ + L T ++ +K +R
Sbjct: 187 EPVYLSQNEGFIVVYSINELRTFETAKQLVKLIR 220
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQV 429
A+YRG+ +LV+DVT SF+ + +W AS D E ++LGNK DL++ R V
Sbjct: 16 AFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RAV 74
Query: 430 SKERGEQLA-IEYQIKFVETSAKDSLNVNMHF 522
S +R + + I + ETSAK+++NV F
Sbjct: 75 SAKRAQAWCHSKNDIPYFETSAKEAINVEQAF 106
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 218 IWDTAGQERFRT 253
IWDTAGQERF++
Sbjct: 1 IWDTAGQERFQS 12
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 268 YRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD-SQRQVSKERG 444
YR G ++V+DVT+ KSFE + W+ ++E+ ++ +++GNK D + ++
Sbjct: 43 YRALSGAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVA 102
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHFTL 528
+ A ++ETSA N++ F +
Sbjct: 103 AKYATNNGFLYIETSALGMCNIDEIFAI 130
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
KL+++GD GVGK++ L + +AF +I T+ D I LDGK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQED 65
Query: 245 F 247
+
Sbjct: 66 Y 66
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDSQRQVSKER 441
Y + G +LVY + N ++F ++K I S +V +++GNK D+ +R+VS
Sbjct: 55 YIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGE 114
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ LA + F ETSAK NV+ F
Sbjct: 115 AKDLAEAWGCPFYETSAKTRSNVDKVF 141
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN----ASADVEKMILGNKCDLDSQRQV- 429
YY+ ++G +V+DVT +F ++ W +++ + + ++L NKCD + V
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVN 769
Query: 430 -SKERGEQLAIEYQIKFVETSAKDSLNVN 513
S + E A + I + ETSAK+ +NVN
Sbjct: 770 NSAQMDEYCADKGFIGWFETSAKEDVNVN 798
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 169
LFK+L+IGD GVGKTS++ R+ F++ + +T+ +
Sbjct: 671 LFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD GVGKTS+L + D F S++ T + + T++++ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHV-TVEVNKKLCMIEFCDTAGQED 78
Query: 245 F 247
F
Sbjct: 79 F 79
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 385 MILGNKCDLDSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVNMHF 522
+++GNKCDL+ +R V K++G+ LA ++ F+ETSAK +NVN F
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 71 LLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERF 247
L +GD G GKT+ + R F +I+T+G++ +K +WDTAGQE+F
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKF 94
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/86 (25%), Positives = 46/86 (53%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YY ++++DVT+ +++N+ NW R++ E ++ ++ GNK D+ R+V K +
Sbjct: 101 YYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDI-KDRKV-KAKA 157
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHF 522
+ +++ + SAK + N F
Sbjct: 158 ITFHRKKNLQYYDLSAKSNYNFEKPF 183
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 352 IEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNV 510
++ N + + +++GNKC LD +R+VS G LA E + F ETSA+ ++NV
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINV 53
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKL 214
MA D ++K+ L G GVGKTSI R S D F S ID I + + KK+K+
Sbjct: 1 MAGPEDEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKI 60
Query: 215 QIWDTAGQERFRT 253
+WDT G E + +
Sbjct: 61 HLWDTLGMEEYES 73
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +2
Query: 68 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERF 247
++L+GDS GKT++L + + FN + +T+ + +++DG++++L +WDT+G E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
D K++ +GD VGKTS L+ + F FI++I D +T+++DGK+ + + DT
Sbjct: 7 DPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTP 65
Query: 233 GQERFRTKQQH 265
G R QH
Sbjct: 66 GTMHPRIPPQH 76
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-----DVEKMILGNKCDLDSQRQV 429
+Y+ + G +LVYDVT+ +SFE + W+ I+++ + V ++ NK D +R V
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD-SRKRLV 68
Query: 430 SKERGEQLAIEYQIKFVETSAK 495
+ G Q A ++ + ETSA+
Sbjct: 69 EESEGRQWAENHKFCYFETSAQ 90
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDSQRQVSKER 441
Y R G +LV+ VT+ SFE I + I + +I GNK DL+ +R VS
Sbjct: 79 YMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAE 138
Query: 442 GEQLA 456
G++LA
Sbjct: 139 GQELA 143
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/73 (31%), Positives = 41/73 (56%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
K D +KL+++G GVGK+++ +F + F + TI ++ + + +D + L I
Sbjct: 6 KDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDIL 64
Query: 224 DTAGQERFRTKQQ 262
DTAGQE F ++
Sbjct: 65 DTAGQEEFSAMRE 77
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD----VEKMILGNKCDLDSQRQV 429
+Y G ++VY +T+ S+E + ++ + + D + +++GNK DL R V
Sbjct: 29 SYIHNGDGFVVVYSITDYYSYEMARQLVKLVTQVRKTDDICQIPIVLVGNKRDLRRGRCV 88
Query: 430 SKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+K+ + A EY ETSA + NV++ F
Sbjct: 89 AKDEAREFASEYGCSHYETSALTNRNVHVIF 119
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
F ++ G S VGKTS++ RF AFN + TI DF I+ + + + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 242 RF 247
F
Sbjct: 88 EF 89
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 244 IPYKTTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD--VEKMILGNKCDLDS 417
IP T + + +++ YDV+NE+SF W+ A +D + ++ K DL
Sbjct: 51 IPETTDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQ 110
Query: 418 QRQVSKERGEQLAIEYQIKFVETSA 492
+R +S ++G+ A +++ E SA
Sbjct: 111 RRVISTKQGKDYANSKNLEYFECSA 135
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDA--FNISFISTIGIDFKIRTIDL 193
K+L+ GDS VGK++++ F D + ++ T+G + ++ +++
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNI 51
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+++++G GKT+IL++ +S I TIG F + T+ K V L IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIG--FNVETLQ-PTKNVTLTIWDVGGQDK 76
Query: 245 FRTKQQH----TTVVLWELCLSTMLRMRRALKTL 334
R +H T +L+ + S +LRM A + L
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEEL 110
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
D ++++ L+GD GVGKT++L RF F + TI ++ ++I++D V L+I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTA 61
Query: 233 --GQERFRTKQQ 262
GQ + + Q
Sbjct: 62 SRGQNSCKLRDQ 73
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+K++++G GVGK+++ +F F + TI DF + I++D L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 242 RF 247
+F
Sbjct: 63 QF 64
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADV 378
+Y G G++LV+D+TN KSF N++ W+ + NAS D+
Sbjct: 80 FYNGINGLILVHDLTNRKSFTNLRKWLAEV-LNASKDL 116
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-----DGKKVKLQIWDT 229
++ ++GDSGVGKTS++ + S TIG +++ D GK L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 230 AG 235
G
Sbjct: 68 GG 69
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+K+ ++G GVGKTS+L F F+ + T+ D+ I ++++DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 242 RF 247
F
Sbjct: 72 AF 73
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+LL++G GKT+IL+ D ++ I TIG + ++ ++ K +K +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 245 FR 250
R
Sbjct: 147 IR 148
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 245 FRTKQQH 265
R +H
Sbjct: 74 IRPLWRH 80
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDTAG 235
+F+++++G GVGKTS++ RF F+ + T+G D +++ L L+I DTAG
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 236 QERFRTKQQHT 268
F ++ T
Sbjct: 166 SYPFPAMKKLT 176
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 YRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
Y+GS I+L +D++N ++FE I++ W+ + + ++++GNK D+ RQ RG
Sbjct: 73 YQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSI-RVLIGNKNDIRKTRQDKDRRG 131
Query: 445 EQL 453
+ L
Sbjct: 132 KVL 134
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K++L GD+ VGKTS L +++ + T ++++ +++ +K L +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQN--ELEGTPTAFANYEL-GLEVGSQKFLLDLWDTEGTTE 64
Query: 245 F 247
+
Sbjct: 65 Y 65
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+IL++ ++ I TIG F + +++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 245 FRTKQQH 265
R +H
Sbjct: 74 IRPLWRH 80
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = +2
Query: 41 AKTYDCLFKLLLIGD-SGVGKTSILFRFSEDAFNISFIS--TIGIDFKIRTID---LDGK 202
++ D FK++ +GD +G GK +SF TIG+DF + I+ D K
Sbjct: 44 SRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKK 103
Query: 203 K---VKLQIWDTAGQERF 247
K VKLQ WD A ERF
Sbjct: 104 KDSTVKLQFWDVAEHERF 121
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSE-DAFNISF-ISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 238
KL+L+G+SG GKTS E +A N + T+G+ + ++ DG +++Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 239 ERFR 250
R++
Sbjct: 320 RRYQ 323
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
KL ++GD VGKT++ + + F +I T + ++DG K + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 245 F 247
F
Sbjct: 68 F 68
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 74 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFR 250
+IG GKT+IL+R + +S + T+G F + T+ K + +WD GQ++ R
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLG--FNVETVTY--KNISFTVWDIGGQDKIR 54
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K+ ++G VGK+S+ +F E F S+ TI F + I G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 245 F 247
+
Sbjct: 67 Y 67
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/60 (28%), Positives = 37/60 (61%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 238
+ K+++IG+ GVGK+++ RF F + T+ ++ + ++ G+ V +++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGE 919
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 36.3 bits (80), Expect = 0.027
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN 363
+Y+ + G +LVYDVT+ +SFE + W+ I+++
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKD 37
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 32 VKMAKTYDCLFKLLLIGDSGVGKTSILFRF 121
+K K D L K+LLIGDS VGKT +L F
Sbjct: 3 MKPRKKQDYLLKVLLIGDSNVGKTKLLLTF 32
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 35.5 bits (78), Expect = 0.048
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
+ +F+L ++G GVGK+S+ R+ ++ F ID GK +++ DTA
Sbjct: 2596 ETMFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTA 2641
Query: 233 GQERF 247
GQE +
Sbjct: 2642 GQEEY 2646
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+L L+G GKT+ + + F+ I T+G F +R + V +++WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGN--VTIKVWDIGGQPR 77
Query: 245 FRT 253
FR+
Sbjct: 78 FRS 80
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 35.1 bits (77), Expect = 0.063
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 KMAKTYDCLFKLLLIGDSGVGKTSILFRF-SEDAFNISFISTIGIDFKIRTIDLDGKKVK 211
K+ D ++LL+G GKT+IL SED +I+ T G F I+++ G +
Sbjct: 9 KLKSEKDREMRILLLGLDNSGKTTILKSLASEDVLHIT--PTQG--FNIKSVQSKG-GFR 63
Query: 212 LQIWDTAGQERFR 250
L +WD GQ + R
Sbjct: 64 LNVWDIGGQRKIR 76
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 388 ILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNV 510
+LGNK DL+ R V + LA +K+ ETSA NV
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNV 42
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 34.7 bits (76), Expect = 0.084
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL--DSQRQVSKE 438
Y RG+ ++ YD+T E S + + + ++ + A + +I+G K DL D R++++
Sbjct: 292 YCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCKKDLVTDDTREITEA 351
Query: 439 RGEQLA-IEYQIK 474
G +LA ++ ++K
Sbjct: 352 AGMELAKVQNELK 364
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
FK+ ++G S VGKTS++ + F I TI D+ I ++ DG + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/87 (29%), Positives = 37/87 (42%)
Frame = +1
Query: 238 REIPYKTTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDS 417
+ P K A + + L+Y VT+ SFE R I++N K I+ DL
Sbjct: 44 KNTPDKVDALLEAANIVYLLYSVTDRASFEEAAWLARRIQQN------KAIVATNKDLKH 97
Query: 418 QRQVSKERGEQLAIEYQIKFVETSAKD 498
QV + G LA E FV+ S +
Sbjct: 98 LSQVLEYEGRFLAQELDGLFVQVSISE 124
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
M + + L ++ + G +GVGKTSI+ RF F+ + T+ D + ++ +G + L
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVE-DCYSKVLNKNGSIMVLN 59
Query: 218 IWDTAGQERF 247
D++G +F
Sbjct: 60 TTDSSGSYQF 69
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 10/54 (18%)
Frame = +1
Query: 382 KMILGNKCDLDSQRQVSKER--GEQLAI--------EYQIKFVETSAKDSLNVN 513
K GNK DL+ QR+VS E+ E +A + ++ VETSAKD N++
Sbjct: 78 KRASGNKKDLEEQREVSSEQVVKEVMAFAREKGCEGKLNMRQVETSAKDDCNIS 131
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 33.1 bits (72), Expect = 0.25
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +2
Query: 68 LLLIGDSGVGKTSILF----RFSEDAFNISF---ISTIGIDFKIRTIDLDGKKVKLQIWD 226
+L++G GKT++L +F + I F +T+G++ TI VKL WD
Sbjct: 24 ILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITIS----HVKLMFWD 79
Query: 227 TAGQERFRTKQQHTTVVLWELCLSTMLRMRRAL 325
GQ+ RT V+ ++ ++ L + AL
Sbjct: 80 LGGQQELRTLWDKVEVMSVKILMTRFLPVEEAL 112
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGI---DFKIRTIDLDGKKVKLQIWDTAG 235
KL+L+G GKT+++ R D +T GI +F+++ D ++ +IWD G
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKK-DFLHREFIFKIWDFGG 611
Query: 236 QERFRTKQQ 262
QE + Q
Sbjct: 612 QEDYYATHQ 620
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 163
+ LFK+L++GD+ VGKTS + R+ + TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFR--FSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 238
+++++GDS VGKT +L + + + + + +I ++ + I +DGK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCDVDNL 78
Query: 239 ERFRTKQQHTTVVLWELCLS 298
+ +K T V LC S
Sbjct: 79 DTKISKPFSDTDVFC-LCFS 97
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 438
AY + I L +DVTN SFEN+ W I V M++G K + +R+VSK
Sbjct: 93 AYIHADLFI-LCFDVTNRASFENVASKWFPEI-RLYEKKVPLMLVGLKPNPVEKRKVSKA 150
Query: 439 RGEQL 453
E++
Sbjct: 151 DAERM 155
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKLQIWDTAGQ 238
F ++++G GKTSIL+R + F +++T+ F + TI K ++ ++WD G+
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFR-EYVNTVPTTAFNVETI-RPFKGIRFKVWDIGGR 76
Query: 239 ERFR 250
E+ R
Sbjct: 77 EQNR 80
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +2
Query: 35 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKL 214
K T + + ++G GVGK++ R F + + +++K ++++DG+ + L
Sbjct: 173 KSFMTNNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLAL 231
Query: 215 QIWDTAGQ 238
+ DTAG+
Sbjct: 232 DVLDTAGK 239
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 268 YRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDL 411
YR + ++ +D+TN SF+N+ W+ + ++ + +++GNK D+
Sbjct: 90 YRDTDVFIICFDITNPTSFQNVSTVWVPEL-KHYMPETPVLVVGNKKDM 137
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRF 121
KL ++GD+ VGKT IL+R+
Sbjct: 10 KLKVVGDTNVGKTCILYRW 28
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 194 DGKKVKLQIWDTAGQERF 247
+G+ ++L +WDTAGQE F
Sbjct: 30 NGEDIRLMLWDTAGQEEF 47
>SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 578 SVGR*EWRPQADAERRSQAGDVAVALQRALTPSAHYDPRPSPIL 709
S+GR + + + E++S + A +R +P+AH P P+P++
Sbjct: 37 SLGRSKKKESKNLEKKSSIDEKDAARKRMHSPAAHAPPGPAPVV 80
>SB_51986| Best HMM Match : HLH (HMM E-Value=0.15)
Length = 2110
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/79 (20%), Positives = 37/79 (46%)
Frame = +3
Query: 489 SKRLVKCEYAFYTLARDIKAKMEKKQEASNPSGGRSGVHKPTLNDARKPVTWLSRCSVL* 668
SKR+ K +Y T + + ++++E N S ++ H ++ ++ + + +C+
Sbjct: 355 SKRVEKIDYCARTGGLPLLRRHQRRKEIENKSRSQNAGHNLGMDSSKSVSSKVVKCTTFT 414
Query: 669 PRLHTTTPAPALF*HCGTL 725
+ TT + H GT+
Sbjct: 415 ASVGTTASDESRISHTGTI 433
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +1
Query: 268 YRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 438
Y+G+ G++++ D+T +F ++ + + + + ++L N+ D++ R V E
Sbjct: 278 YKGTHGVLMLLDITKPWTFTYVRRELPKVPPH----IPVLVLANRRDMEEHRLVDAE 330
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 208
+++LIG GKTS+ F+ S +ST GI+ T ++D ++V
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVDVEQV 339
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 86 SGVG-KTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTKQQ 262
SG G KT+IL++ ++ + T+ F + TI K + +WD GQ++ R +
Sbjct: 117 SGRGRKTTILYKLKLKE-TVNTVPTVA--FNVETIS-PCKNITFSVWDIGGQDKIRRLWR 172
Query: 263 H 265
H
Sbjct: 173 H 173
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 163
+ ++++G +GVGKT+++ RF F + T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_20875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVN 513
+ E LA + ++KF TS K+ LNVN
Sbjct: 2 DEAESLAKKLKLKFYRTSVKEDLNVN 27
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 68 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 169
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 248 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 280
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAF 136
L+K++ G GVGKTS+ R ++ F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 68 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 169
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 78 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 110
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 313 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 492
++ E + R EE +A V M + DLD +RQV +R E L E + + SA
Sbjct: 2348 KRQLEGVNEKNRKAEEKYNASVNSM----RNDLDKERQVLADRNENLT-ETIHRLKDESA 2402
Query: 493 KDSLNVNMH 519
K + + H
Sbjct: 2403 KLNEKIIRH 2411
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVK 211
+++LIG GKTS+ F+ +ST GI+ T ++D +VK
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_14584| Best HMM Match : IBV_3C (HMM E-Value=4.1)
Length = 311
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 519 FYTLARDIKAKMEKKQEASNPSG 587
F+ L++D+K+K EKK + S P+G
Sbjct: 282 FFNLSKDVKSKYEKK-DTSQPNG 303
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -2
Query: 186 IVRILKSIPIVDIKEMLNASSENLNSIDVFPTPESPIRSNLNKQS*VFAIFTTI 25
+V + S+ IV + + + EN+ +++ TP+S ++ + KQ+ V AI T I
Sbjct: 47 LVDDVNSVKIVTGDVIHDFAGENVKYLELRSTPKSNPKTGMTKQAYVDAILTAI 100
>SB_2307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 519 FYTLARDIKAKMEKKQEASNPSG 587
F+ L++D+K+K EKK + S P+G
Sbjct: 85 FFNLSKDVKSKYEKK-DTSQPNG 106
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 208
+++LIG GKTS+ F+ +ST GI+ T ++D ++V
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVDVEQV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,908,626
Number of Sequences: 59808
Number of extensions: 501481
Number of successful extensions: 1597
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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