Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00335
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            77   8e-16
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    48   3e-07
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    29   0.16 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   3.4  
EF519362-1|ABP68471.1|  506|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519360-1|ABP68469.1|  499|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519356-1|ABP68465.1|  500|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519355-1|ABP68464.1|  506|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519354-1|ABP68463.1|  506|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519353-1|ABP68462.1|  470|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519351-1|ABP68460.1|  486|Anopheles gambiae LRIM1 protein.           24   6.0  
EF519349-1|ABP68458.1|  486|Anopheles gambiae LRIM1 protein.           24   6.0  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 76.6 bits (180), Expect = 8e-16
 Identities = 33/83 (39%), Positives = 52/83 (62%)
 Frame = +1

Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
           YYRG+   ++VYD+ N  SF   K W++ ++  AS ++   + GNK DL + R V  E  
Sbjct: 93  YYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEA 152

Query: 445 EQLAIEYQIKFVETSAKDSLNVN 513
           +Q A + ++ F+ETSAK ++NVN
Sbjct: 153 KQYADDNRLLFMETSAKTAVNVN 175



 Score = 69.7 bits (163), Expect = 9e-14
 Identities = 32/66 (48%), Positives = 46/66 (69%)
 Frame = +2

Query: 56  CLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 235
           C FKL+L+G+S VGK+S++ RF +  F+    STIG  F  +T+ +D   VK +IWDTAG
Sbjct: 23  CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAG 82

Query: 236 QERFRT 253
           QER+ +
Sbjct: 83  QERYHS 88


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 48.0 bits (109), Expect = 3e-07
 Identities = 22/61 (36%), Positives = 38/61 (62%)
 Frame = +2

Query: 65  KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
           K +++GD  VGKT +L  ++ D+F   ++ T   ++    + +DG +V L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 245 F 247
           +
Sbjct: 67  Y 67


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 301 DVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQI 471
           D T ++ ++NIK W+  + EN  ++    +LGN    D++R VS   G   A  YQI
Sbjct: 329 DTTGQQFYDNIKRWLDVVPENRFSN---WVLGNH---DNKR-VSSRLGVARADLYQI 378


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +1

Query: 367 SADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVNMHFT 525
           SA ++ + L  KC  + ++Q ++ + E  AI  + K +ETS    + +    T
Sbjct: 241 SATLKDLKLAKKCTEEKEQQYNQFKQEMEAILARKKELETSKAKQVAIGQRST 293


>EF519362-1|ABP68471.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519360-1|ABP68469.1|  499|Anopheles gambiae LRIM1 protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519356-1|ABP68465.1|  500|Anopheles gambiae LRIM1 protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519355-1|ABP68464.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519354-1|ABP68463.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519353-1|ABP68462.1|  470|Anopheles gambiae LRIM1 protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519351-1|ABP68460.1|  486|Anopheles gambiae LRIM1 protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


>EF519349-1|ABP68458.1|  486|Anopheles gambiae LRIM1 protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 216 KYGILLVKRDSVQNNSILPW 275
           +Y  + V++ SVQNN+I  W
Sbjct: 440 RYEEMYVEQQSVQNNAIRDW 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,765
Number of Sequences: 2352
Number of extensions: 15981
Number of successful extensions: 31
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)