Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00335
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 147 7e-36
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 147 7e-36
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 137 7e-33
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 124 5e-29
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 124 5e-29
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 116 1e-26
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 112 3e-25
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 104 8e-23
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 102 2e-22
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 102 2e-22
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 102 2e-22
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 102 2e-22
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 102 2e-22
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 96 3e-20
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 94 1e-19
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 92 5e-19
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 89 3e-18
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 89 3e-18
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 88 6e-18
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 88 7e-18
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 87 1e-17
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 87 2e-17
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 83 3e-16
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 83 3e-16
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 82 4e-16
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 80 1e-15
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 79 3e-15
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 78 8e-15
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 75 6e-14
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 75 7e-14
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 75 7e-14
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 72 4e-13
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 70 2e-12
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 68 6e-12
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 68 6e-12
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 66 2e-11
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 64 1e-10
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 64 1e-10
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 62 6e-10
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 62 6e-10
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 61 7e-10
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 60 2e-09
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 60 2e-09
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 60 2e-09
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 58 7e-09
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 57 1e-08
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 57 1e-08
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 55 6e-08
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 55 6e-08
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 54 9e-08
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 54 9e-08
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 52 3e-07
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 52 6e-07
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 52 6e-07
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 52 6e-07
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 52 6e-07
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 52 6e-07
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 52 6e-07
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 51 8e-07
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 49 3e-06
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 49 3e-06
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 45 5e-05
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 44 9e-05
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 44 1e-04
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 44 1e-04
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 44 1e-04
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 44 2e-04
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 42 4e-04
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 42 4e-04
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 42 5e-04
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 42 5e-04
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 42 6e-04
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 41 8e-04
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 41 8e-04
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 41 8e-04
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 40 0.001
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 37 0.018
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 37 0.018
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 36 0.032
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 36 0.032
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 36 0.042
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 36 0.042
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 35 0.074
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 35 0.074
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 33 0.17
Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 31 0.69
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 30 1.6
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 30 2.1
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 30 2.1
AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protei... 30 2.1
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 30 2.1
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 30 2.1
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73975-3|CAA98277.2| 269|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70781-8|CAA94836.2| 269|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.4
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 147 bits (357), Expect = 7e-36
Identities = 64/89 (71%), Positives = 83/89 (93%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MGI+LVYD+TNE+SFENIKNWIRNIEE+A++DVE+MI+GNKCD++ +R+VS+
Sbjct: 74 TTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSR 133
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RGEQLAIEY KF+ETSAK +LN++ F
Sbjct: 134 DRGEQLAIEYGTKFLETSAKANLNIDEAF 162
Score = 137 bits (332), Expect = 7e-33
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
MAKTYD LFKLLLIGDSGVGKT +LFRFS+D+FN SFISTIGIDFKIRTI+LDGKK+KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 218 IWDTAGQERFRT 253
IWDTAGQERFRT
Sbjct: 61 IWDTAGQERFRT 72
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 489 SKRLVKCEYAFYTLARDIKAKMEKKQEASNPSGGRSG 599
+K + + AF+TLARDIK+KME+ + + S +G
Sbjct: 152 AKANLNIDEAFFTLARDIKSKMEQNEMRAGGSVSNTG 188
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 147 bits (357), Expect = 7e-36
Identities = 64/89 (71%), Positives = 83/89 (93%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MGI+LVYD+TNE+SFENIKNWIRNIEE+A++DVE+MI+GNKCD++ +R+VS+
Sbjct: 74 TTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSR 133
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RGEQLAIEY KF+ETSAK +LN++ F
Sbjct: 134 DRGEQLAIEYGTKFLETSAKANLNIDEAF 162
Score = 137 bits (332), Expect = 7e-33
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
MAKTYD LFKLLLIGDSGVGKT +LFRFS+D+FN SFISTIGIDFKIRTI+LDGKK+KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 218 IWDTAGQERFRT 253
IWDTAGQERFRT
Sbjct: 61 IWDTAGQERFRT 72
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 489 SKRLVKCEYAFYTLARDIKAKMEKKQEASNPSGGRSG 599
+K + + AF+TLARDIK+KME+ + + S +G
Sbjct: 152 AKANLNIDEAFFTLARDIKSKMEQNEMRAGGSVSNTG 188
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 137 bits (332), Expect = 7e-33
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
MAKTYD LFKLLLIGDSGVGKT +LFRFS+D+FN SFISTIGIDFKIRTI+LDGKK+KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 218 IWDTAGQERFRT 253
IWDTAGQERFRT
Sbjct: 61 IWDTAGQERFRT 72
Score = 98.7 bits (235), Expect = 4e-21
Identities = 41/50 (82%), Positives = 50/50 (100%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 405
TTAYYRG+MGI+LVYD+TNE+SFENIKNWIRNIEE+A++DVE+MI+GNKC
Sbjct: 74 TTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 124 bits (300), Expect = 5e-29
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ YD LFKLLLIGDSGVGKT IL+RFS+DAFN +FISTIGIDFKI+TI+L GKK+KLQIW
Sbjct: 4 RPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIW 63
Query: 224 DTAGQERFRT 253
DTAGQERF T
Sbjct: 64 DTAGQERFHT 73
Score = 124 bits (298), Expect = 9e-29
Identities = 56/89 (62%), Positives = 74/89 (83%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TT+YYRG+MGIMLVYD+TN KSF+NI W+RNI+E+AS DV KMILGNKCD+ +R VS+
Sbjct: 75 TTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSR 134
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
ERGE++A ++ I F ETSAK +++V+ F
Sbjct: 135 ERGEKIAQDHGISFHETSAKLNVHVDTAF 163
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 124 bits (300), Expect = 5e-29
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ YD LFKLLLIGDSGVGKT IL+RFS+DAFN +FISTIGIDFKI+TI+L GKK+KLQIW
Sbjct: 4 RPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIW 63
Query: 224 DTAGQERFRT 253
DTAGQERF T
Sbjct: 64 DTAGQERFHT 73
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 405
TT+YYRG+MGIMLVYD+TN KSF+NI W+RNI+E+AS DV KMILGNKC
Sbjct: 75 TTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKC 124
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 116 bits (280), Expect = 1e-26
Identities = 53/72 (73%), Positives = 62/72 (86%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRTI+LDGK +KLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 218 IWDTAGQERFRT 253
IWDTAGQERFRT
Sbjct: 64 IWDTAGQERFRT 75
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/89 (43%), Positives = 63/89 (70%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T++YYRG+ GI++VYD+T++++F N+K W++ I+ A +V K+++GNKCDL ++R V
Sbjct: 77 TSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVET 136
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ + A + I F+ETSAK S NV F
Sbjct: 137 QAAQDYAGQLGIPFLETSAKSSTNVEQAF 165
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 112 bits (269), Expect = 3e-25
Identities = 48/70 (68%), Positives = 65/70 (92%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ YD LFKLL+IGDSGVGK+S+L RF+++ F+ ++I+TIG+DFKIRT+D++G++VKLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 224 DTAGQERFRT 253
DTAGQERFRT
Sbjct: 65 DTAGQERFRT 74
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T+ YYRG+ G+++VYDVTN +SF N+K W++ IE N + V+K+++GNKC+ + +R V +
Sbjct: 76 TSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS-VQKVLVGNKCEENERRVVLE 134
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHFT 525
A I F ETSAK+ NV FT
Sbjct: 135 SDARNYAQSMNISFFETSAKEDKNVEPMFT 164
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 104 bits (249), Expect = 8e-23
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRTI+LDGK +KLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 218 IWDTAG 235
IWDTAG
Sbjct: 64 IWDTAG 69
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 102 bits (245), Expect = 2e-22
Identities = 43/89 (48%), Positives = 68/89 (76%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS
Sbjct: 88 TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSM 147
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RG QLA + ++F ETSAK+++NV F
Sbjct: 148 DRGRQLADQLGLEFFETSAKENINVKAVF 176
Score = 102 bits (244), Expect = 3e-22
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 224 DTAGQERFRT 253
DTAGQER+RT
Sbjct: 77 DTAGQERYRT 86
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 102 bits (245), Expect = 2e-22
Identities = 43/89 (48%), Positives = 68/89 (76%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS
Sbjct: 88 TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSM 147
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RG QLA + ++F ETSAK+++NV F
Sbjct: 148 DRGRQLADQLGLEFFETSAKENINVKAVF 176
Score = 102 bits (244), Expect = 3e-22
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 224 DTAGQERFRT 253
DTAGQER+RT
Sbjct: 77 DTAGQERYRT 86
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 102 bits (245), Expect = 2e-22
Identities = 43/89 (48%), Positives = 68/89 (76%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS
Sbjct: 88 TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSM 147
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RG QLA + ++F ETSAK+++NV F
Sbjct: 148 DRGRQLADQLGLEFFETSAKENINVKAVF 176
Score = 102 bits (244), Expect = 3e-22
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 224 DTAGQERFRT 253
DTAGQER+RT
Sbjct: 77 DTAGQERYRT 86
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 102 bits (245), Expect = 2e-22
Identities = 43/89 (48%), Positives = 68/89 (76%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS
Sbjct: 102 TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSM 161
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RG QLA + ++F ETSAK+++NV F
Sbjct: 162 DRGRQLADQLGLEFFETSAKENINVKAVF 190
Score = 102 bits (244), Expect = 3e-22
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Query: 224 DTAGQERFRT 253
DTAGQER+RT
Sbjct: 91 DTAGQERYRT 100
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 102 bits (245), Expect = 2e-22
Identities = 43/89 (48%), Positives = 68/89 (76%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TTAYYRG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS
Sbjct: 88 TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSM 147
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+RG QLA + ++F ETSAK+++NV F
Sbjct: 148 DRGRQLADQLGLEFFETSAKENINVKAVF 176
Score = 102 bits (244), Expect = 3e-22
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 224 DTAGQERFRT 253
DTAGQER+RT
Sbjct: 77 DTAGQERYRT 86
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 95.9 bits (228), Expect = 3e-20
Identities = 40/62 (64%), Positives = 57/62 (91%)
Frame = +2
Query: 44 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
+ YD LFKLL+IGDSGVGK+S+L RF+++ F+ ++I+TIG+DFKIRT+D++G++VKLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 224 DT 229
DT
Sbjct: 65 DT 66
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 93.9 bits (223), Expect = 1e-19
Identities = 41/67 (61%), Positives = 55/67 (82%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
YD LFK++LIGDSGVGK+++L RF+ + FN+ STIG++F R+I ++GK VK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 230 AGQERFR 250
AGQER+R
Sbjct: 68 AGQERYR 74
Score = 84.2 bits (199), Expect = 9e-17
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T+AYYRG++G +LVYD+ ++EN++ W++ + ++A ++ M++GNK DL R V
Sbjct: 77 TSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPT 136
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHFT 525
+ + A Q+ F+ETSA DS NV FT
Sbjct: 137 DEAKIYAERNQLSFIETSALDSTNVEAAFT 166
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/67 (59%), Positives = 55/67 (82%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
YD LFK++LIGDSGVGK+++L RF+ + F++ STIG++F R+I ++GK VK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 230 AGQERFR 250
AGQER+R
Sbjct: 68 AGQERYR 74
Score = 61.3 bits (142), Expect = 7e-10
Identities = 21/51 (41%), Positives = 38/51 (74%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 408
T+AYYRG++G +LVYD+ ++EN++ W++ + ++A ++ M +GNKCD
Sbjct: 77 TSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TT+YYR + ++LVYD+ N SFEN +NW+ I+E V+ ++GNKCDL R V
Sbjct: 69 TTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPT 126
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ G++LA YQI F+ETSAK NV+ F
Sbjct: 127 DEGKRLAEAYQIPFMETSAKTGFNVDRAF 155
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/64 (59%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAF-NISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
K++L+GDS GKT +L R+ + AF N +FIST+GID++ + I + KKVKLQIWDTAGQE
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
Query: 242 RFRT 253
RFR+
Sbjct: 64 RFRS 67
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
TT+YYR + ++LVYD+ N SFEN +NW+ I+E V+ ++GNKCDL R V
Sbjct: 69 TTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPT 126
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ G++LA YQI F+ETSAK NV+ F
Sbjct: 127 DEGKRLAEAYQIPFMETSAKTGFNVDRAF 155
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/64 (59%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAF-NISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
K++L+GDS GKT +L R+ + AF N +FIST+GID++ + I + KKVKLQIWDTAGQE
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
Query: 242 RFRT 253
RFR+
Sbjct: 64 RFRS 67
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 88.2 bits (209), Expect = 6e-18
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
+D LFK++L+GD GVGKT ++ RF F +TIG+DF ++T+ +DGK+VKLQIWDT
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 230 AGQERFRTKQQ 262
GQERFRT Q
Sbjct: 67 GGQERFRTITQ 77
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T +YYR + GI+L YD+T ++SF +++ WI ++ + A+ +V K+++G KCDL+ QR +
Sbjct: 76 TQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEA 135
Query: 436 ERGEQL-AIEYQIKFVETSAKDSLNVNMHF 522
E E L +ETSAK ++NV+ F
Sbjct: 136 EEAEMLQRANGMFAMLETSAKGNVNVDNAF 165
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 87.8 bits (208), Expect = 7e-18
Identities = 35/69 (50%), Positives = 55/69 (79%)
Frame = +2
Query: 47 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+Y+ LFK++++GD GK+ IL RF+E++F + IST+G+DFK++TI L K++L++WD
Sbjct: 2 SYNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWD 61
Query: 227 TAGQERFRT 253
TAG ER+RT
Sbjct: 62 TAGMERYRT 70
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +1
Query: 250 YKT--TAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDSQ 420
Y+T +YY + G+M VYD+TNEKSFEN+ K W++ I+++A + M++GNK D+D +
Sbjct: 68 YRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQE 127
Query: 421 RQVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
R+V +R E+LA + E SAK +N F
Sbjct: 128 RKVDFDRAEKLASRLGVSLYEVSAKTGINCEEAF 161
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/63 (57%), Positives = 52/63 (82%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K+L+IG+SGVGK+S++ RF +D F+ +TIG+DF++ ++ +DG +VKL IWDTAGQER
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQER 72
Query: 245 FRT 253
FRT
Sbjct: 73 FRT 75
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDSQRQVS 432
T +YYRG+ G++ VYDVT+ SFE + +W++ ++ + D + KM++ NK D+ + R V+
Sbjct: 77 TPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVT 135
Query: 433 KERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
+E G + A ++ F+E SAK V F
Sbjct: 136 REEGLKFAKRHRTLFIEASAKTKEGVQCTF 165
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/89 (39%), Positives = 63/89 (70%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T +YYRG+ G +LVYD+T +F ++ +W+ + +++++++ M++GNK DL+++R+V +
Sbjct: 72 TRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKR 131
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
E GE A E+ + F+ETSAK + NV F
Sbjct: 132 EEGEAFAREHGLVFMETSAKTAANVEEAF 160
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/69 (50%), Positives = 51/69 (73%)
Frame = +2
Query: 47 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+Y LFK ++IGD+GVGK+ +L +F++ F TIG++F R + +DGK++KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Query: 227 TAGQERFRT 253
TAGQE FR+
Sbjct: 62 TAGQESFRS 70
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 84.2 bits (199), Expect = 9e-17
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +2
Query: 38 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 217
M Y LFK++LIG+ GVGK+++L RF+ + FN+ TIG++F + I ++GK VK+Q
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQ 60
Query: 218 IWDTAGQERFR 250
IWDTAG ERFR
Sbjct: 61 IWDTAGMERFR 71
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/89 (35%), Positives = 57/89 (64%)
Frame = +1
Query: 259 TAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 438
++YYRG++G +LVYD++ K++E+++ W++ + ++A+ D+ ++GNK DL V +
Sbjct: 75 SSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL--SHAVPTD 132
Query: 439 RGEQLAIEYQIKFVETSAKDSLNVNMHFT 525
+ A I F+ETSA D+ NV FT
Sbjct: 133 EAKIYAERNHISFIETSALDNTNVEAAFT 161
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILGNKCDLDSQR 423
T +YYR S+G++ +YD TN +SFE+++NW++ N ++G K D+DSQR
Sbjct: 84 TKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQR 143
Query: 424 QVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
QV+ E GE A +++KF+ETS++ NVN F
Sbjct: 144 QVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAF 176
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-DGKKVKLQIWDTAGQ 238
++L++IGDS VGK+S+L F+E T+G+DF R I+L G +VKLQ+WDTAGQ
Sbjct: 18 YRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQ 77
Query: 239 ERFRT 253
E+FR+
Sbjct: 78 EKFRS 82
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/86 (41%), Positives = 58/86 (67%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YYRGS G++LV+D+T+ KSFE +KNW+ I+ E +I+GNK DL+ +RQV+++
Sbjct: 81 YYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDA 140
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHF 522
E A ++ETSA+D++ ++ F
Sbjct: 141 EAYAESEGALYMETSAQDNVGISDAF 166
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/62 (41%), Positives = 45/62 (72%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FK++L+G+ VGK+S++ RF E+ F+ +STI F+ +T++++ + L IWDTAGQE
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Query: 242 RF 247
++
Sbjct: 73 KY 74
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/83 (40%), Positives = 55/83 (66%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YYRG+ ++VYD+TN++SF+ KNW++ ++ AS ++ + GNK D+ ++R V E
Sbjct: 88 YYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEA 147
Query: 445 EQLAIEYQIKFVETSAKDSLNVN 513
A + + F+ETSAK S+NVN
Sbjct: 148 NAYAEDNALLFMETSAKTSMNVN 170
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 56 CLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 235
C FKL+L+G+S VGK+S++ RF + F+ STIG F +T+ LD +K +IWDTAG
Sbjct: 18 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAG 77
Query: 236 QERFRT 253
QER+ +
Sbjct: 78 QERYHS 83
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
Y +FK ++IGD GVGK+ +L +F+E F TIG++F R I++ G+K+KLQIWDT
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
Query: 230 AGQERFR 250
AGQERFR
Sbjct: 68 AGQERFR 74
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/89 (33%), Positives = 51/89 (57%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T +YYRG+ G ++VYD+T ++ ++ +W+ + + + + ++GNK DL+ QR V
Sbjct: 77 TRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPY 136
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
E + A E + F+E SAK NV F
Sbjct: 137 EEAKAFAEENGLTFLECSAKTGSNVEDAF 165
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/86 (44%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVS 432
TTA++R +MG +L++D+TNE+SF NI++W+ ++ +A + +I+ GNK DL+++RQVS
Sbjct: 82 TTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVS 141
Query: 433 KERGEQLAIEYQIKFVETSAKDSLNV 510
R +QLA + + + ETSA S NV
Sbjct: 142 TARAKQLADQLGLPYFETSACTSTNV 167
Score = 79.4 bits (187), Expect = 3e-15
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 9/77 (11%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD---------GK 202
YD L K L +GDSGVGKTS L R++++ F FIST+GIDFK + + G+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 203 KVKLQIWDTAGQERFRT 253
+V LQ+WDTAGQERFR+
Sbjct: 64 RVLLQLWDTAGQERFRS 80
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/86 (44%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVS 432
TTA++R +MG +L++D+TNE+SF NI++W+ ++ +A + +I+ GNK DL+++RQVS
Sbjct: 82 TTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVS 141
Query: 433 KERGEQLAIEYQIKFVETSAKDSLNV 510
R +QLA + + + ETSA S NV
Sbjct: 142 TARAKQLADQLGLPYFETSACTSTNV 167
Score = 79.4 bits (187), Expect = 3e-15
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 9/77 (11%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD---------GK 202
YD L K L +GDSGVGKTS L R++++ F FIST+GIDFK + + G+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 203 KVKLQIWDTAGQERFRT 253
+V LQ+WDTAGQERFR+
Sbjct: 64 RVLLQLWDTAGQERFRS 80
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
Y LFK++L+G++GVGKT ++ +F++ F +TIG+DF I+T+ + K+KLQIWDT
Sbjct: 4 YKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDT 63
Query: 230 AGQERFRTKQQ 262
AGQERFR+ Q
Sbjct: 64 AGQERFRSITQ 74
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
T +YYR + I+LVYDV+ + SF+ + W+ IE A+ V K+++GNK D +R+V +
Sbjct: 73 TQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPE 132
Query: 436 ERGEQLAIEYQIK-FVETSAKDSLNVNMHF 522
G + Q F+ETSA D+ NV+ F
Sbjct: 133 RIGRDFSDVNQFDYFLETSALDATNVDQLF 162
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/113 (32%), Positives = 74/113 (65%), Gaps = 7/113 (6%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
F++++ GD+ VGK+S + R F ST+G+DF ++T+++DG+ V LQ+WDTAGQE
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQE 521
Query: 242 RFRT------KQQHTTVVLWELCL-STMLRMRRALKTLRIGLGTLKRMPVLML 379
RFR+ ++ ++++++C + LR+R ++T++ T + +P++++
Sbjct: 522 RFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIK--ESTERSIPIILV 572
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD--LDSQRQVSK 435
+Y+R + G +LVYDV E+SF +++WI I+E+ + +++GNK D + + V+K
Sbjct: 529 SYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAK 588
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVN 513
G +A + F+ETSA D N++
Sbjct: 589 TDGASMAAAMGVLFMETSALDGSNID 614
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
D +FK ++IGD GVGK+++L RF F+ ST+GI+F R +++D KKVKL +WDT
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTC 63
Query: 233 GQERFRT 253
GQERFR+
Sbjct: 64 GQERFRS 70
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/87 (37%), Positives = 59/87 (67%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 441
+YYR ++G +LVYD+T+ +SF ++++W+ +++ D+ +++GNK DL++ R+V KE
Sbjct: 74 SYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEE 133
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
GE A E+ + F+E SAK + V F
Sbjct: 134 GEAFAREFGLIFMEISAKTNEYVEEAF 160
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/64 (53%), Positives = 51/64 (79%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FKL+ +G+ VGKTSI+ RF D+F+ ++ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 71
Query: 242 RFRT 253
RFR+
Sbjct: 72 RFRS 75
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/87 (40%), Positives = 50/87 (57%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 441
+Y R S ++VYD+TN SF W+ ++ DV +++GNK DL +RQVS E
Sbjct: 79 SYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTED 138
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
GE+ A + + F+ETSAK NV F
Sbjct: 139 GEKKARDLNVMFIETSAKAGYNVKQLF 165
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 79.4 bits (187), Expect = 3e-15
Identities = 34/64 (53%), Positives = 51/64 (79%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FKL+ +G+ VGKTS++ RF D+F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 70
Query: 242 RFRT 253
RFR+
Sbjct: 71 RFRS 74
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 441
+Y R S ++VYD+TN SF WI ++ +DV M++GNK DL +RQV+ +
Sbjct: 78 SYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDE 137
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
GE+ A E + F+ETSAK NV F
Sbjct: 138 GERKAKELNVMFIETSAKAGYNVKQLF 164
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
+D LFK++L+GD GVGKT ++ RF F +TIG+DF ++T+ +DGK+VKLQIWDT
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 230 AGQ 238
AG+
Sbjct: 67 AGE 69
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/87 (39%), Positives = 57/87 (65%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 441
AYYR ++G +LVYD+T KSF +++ W+ ++ ++ ++ M++GNK DL + R V+ E
Sbjct: 74 AYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEE 133
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
GE A + + F+ETSAK + +V F
Sbjct: 134 GEAFAKKNGLTFMETSAKANKHVEKAF 160
Score = 74.9 bits (176), Expect = 6e-14
Identities = 29/67 (43%), Positives = 50/67 (74%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
D +FK ++IGD GVGK+++L RF+++ F+ +T+G++F + + +D KV+L++WDT
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTC 63
Query: 233 GQERFRT 253
GQE FR+
Sbjct: 64 GQENFRS 70
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/65 (49%), Positives = 49/65 (75%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 238
L K++++GDSGVGKTS++ ++ F+ + +TIG DF R +++D + V LQIWDTAGQ
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQ 68
Query: 239 ERFRT 253
ERF++
Sbjct: 69 ERFQS 73
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = +1
Query: 262 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS-ADVEK---MILGNKCDLDSQRQV 429
A+YRG+ +L +DVTN SF+++ +W AS D + ++LGNK DL+SQR V
Sbjct: 77 AFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAV 136
Query: 430 SKERGEQ-LAIEYQIKFVETSAKDSLNVNMHF 522
S +R + + I + E SAK++LNV F
Sbjct: 137 SSKRAQSWCQTKGNIPYYEVSAKEALNVEAAF 168
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/65 (49%), Positives = 48/65 (73%)
Frame = +2
Query: 47 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+Y LFK ++IGD+GVGK+ +L +F++ F TIG++F R + +DGK++KLQ+WD
Sbjct: 2 SYAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWD 61
Query: 227 TAGQE 241
TAGQE
Sbjct: 62 TAGQE 66
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 74.5 bits (175), Expect = 7e-14
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-DGKKVKLQIWDT 229
D +FK++ +GDS VGKT L RF + F F +TIG+DF ++T+ + + + +Q+WDT
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDT 259
Query: 230 AGQERFR--TKQ 259
AGQERFR TKQ
Sbjct: 260 AGQERFRSITKQ 271
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL---DSQRQ 426
T Y+R + G++L++DVT+E+SF N++NWI ++ ++GNK DL D R
Sbjct: 269 TKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARS 328
Query: 427 VSKERGEQLAIEYQIKFVETSAKDSLNVN 513
E+LA+E++I F ETSA ++
Sbjct: 329 AVYRAAEKLAVEFKIPFFETSAYTGFGID 357
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 74.5 bits (175), Expect = 7e-14
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-DGKKVKLQIWDTAGQE 241
K++++G+SG GKT++L F ++ F ++TIGIDFK + + L DG+ ++LQ+WDTAGQE
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQE 67
Query: 242 RFR 250
RFR
Sbjct: 68 RFR 70
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 229
Y +FK ++IGD GVGK+ +L +F+E F TIG++F R I++ G+K+KLQIWDT
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
Query: 230 AG 235
AG
Sbjct: 68 AG 69
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKER 441
Y + G ++VY +T++++F +I+N I S +V +++GNKCDL QRQV E
Sbjct: 71 YIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEE 130
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
G LA + F E SAK++ NVN+ F
Sbjct: 131 GLALAESWSCPFTECSAKNNQNVNVTF 157
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FK++++G GVGK+++ +F F + TI DF + I++DG+ L+I DTAG E
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTE 62
Query: 242 RF 247
+F
Sbjct: 63 QF 64
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQ 238
+K+L+IGD GVGKTSI+ RF + F+ ++ +TIG+DF ++ + +D V LQIWD +GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 239 ERF 247
+R+
Sbjct: 72 DRY 74
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS-AD---VEKMILGNKCDLDSQR 423
T YY+ + ++V D T E++ E W ++++ + AD V ++L NKCD+D++
Sbjct: 78 TRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNKL 137
Query: 424 QVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
K + + F TSAK+S+ + F
Sbjct: 138 GDDKLYDLETNNGFVGSF-RTSAKESVGIEEAF 169
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQ 238
+K+L+IGD GVGKTSI+ RF + F+ ++ +TIG+DF ++ + +D V LQIWD +GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 239 ERF 247
+R+
Sbjct: 72 DRY 74
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS-AD---VEKMILGNKCDLDSQR 423
T YY+ + ++V D T E++ E W ++++ + AD V ++L NKCD+D++
Sbjct: 78 TRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNKL 137
Query: 424 QVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
K + + F TSAK+S+ + F
Sbjct: 138 GDDKLYDLETNNGFVGSF-RTSAKESVGIEEAF 169
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD---------GK 202
YD L K L GD GVGKTS L R++++ F FIST+GIDFK + + + G+
Sbjct: 4 YDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQ 63
Query: 203 KVKLQIWDTAG 235
+V LQIWDTAG
Sbjct: 64 RVLLQIWDTAG 74
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/63 (42%), Positives = 46/63 (73%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FK++++G++ VGKT + FRF F +TIG+DF+ R+ ++ + +++Q+WDTAGQE
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQE 160
Query: 242 RFR 250
R+R
Sbjct: 161 RYR 163
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA---SADVEKMILGNKCDLDSQRQVSK 435
YYR ++ VYDVT +SF ++ WI+ E++ ++V ++++GNKCD++ +VS
Sbjct: 170 YYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVST 229
Query: 436 ERGEQLAIEYQIKFVETSAK 495
+ + A + ETSAK
Sbjct: 230 DEAQMFADRNNMALFETSAK 249
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKER 441
Y + G +LVY +T + +F ++ + I D MIL GNKCDL+ +R V K++
Sbjct: 71 YMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQ 130
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
G+ LA ++ F+ETSAK +NV+ F
Sbjct: 131 GQNLARQFGSAFLETSAKAKINVSEVF 157
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/62 (32%), Positives = 41/62 (66%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+K++++G GVGK+++ +F + F + TI ++ + +++DG++ L+I DTAG E
Sbjct: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
Query: 242 RF 247
+F
Sbjct: 63 QF 64
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/57 (47%), Positives = 44/57 (77%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 232
F+L+ +G+ VGKTS++ RF D+F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTA
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2
Query: 110 LFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 253
+ RF +D F+ +TIG+DF++ ++ +DG +VKL IWDTAGQERFRT
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRT 48
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 17/106 (16%)
Frame = +1
Query: 256 TTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDL------- 411
T +YYRG+ G++ VYDVT+ SFE + +W++ ++ + D + KM++ NK D+
Sbjct: 50 TPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRKSRFC 109
Query: 412 ---------DSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
R V++E G + A ++ F+E SAK V F
Sbjct: 110 SIFGLKNNFQPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTF 155
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFEN---IKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
Y RG G +LV+ VT KSFE + N + +++ + V +++ NK DL +QR VS+
Sbjct: 85 YIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPV--LLVANKVDLINQRVVSE 142
Query: 436 ERGEQLAIEYQIKFVETSAKD-SLNVNMHF 522
+ G +LA + ++ ++ETSAK+ +NV+ F
Sbjct: 143 QEGRELAAQLKLMYIETSAKEPPVNVDAAF 172
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+KL++IGD GVGK+S+ +F + F + TI D I+ ++DG V + + DTAGQE
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 242 RFRTKQQ 262
F ++
Sbjct: 77 EFSAMRE 83
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFEN---IKNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 435
Y RG G +LV+ VT KSFE + N + +++ + V +++ NK DL +QR VS+
Sbjct: 85 YIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPV--LLVANKVDLINQRVVSE 142
Query: 436 ERGEQLAIEYQIKFVETSAKD-SLNVNMHF 522
+ G +LA + ++ ++ETSAK+ +NV+ F
Sbjct: 143 QEGRELAAQLKLMYIETSAKEPPVNVDAAF 172
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+KL++IGD GVGK+S+ +F + F + TI D I+ ++DG V + + DTAGQE
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 242 RFRTKQQ 262
F ++
Sbjct: 77 EFSAMRE 83
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 223
FKL+ +G+ VGKTSI+ RF D+F+ ++ +TIGIDF +T+ L+ + ++LQIW
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 283 GIMLVYDVTNEKSFENIKNWIRNIEEN-ASADVEKMILGNKCDLDSQRQVSKERGEQLAI 459
G +LVY + + KSFE N I + +I+GNK DL +QR V E GE+LA
Sbjct: 87 GFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELAR 146
Query: 460 EYQIKFVETSAKDSLNVNMHFTL 528
++ KFVE +A++S V+ F L
Sbjct: 147 QWDAKFVEITARESNRVHEVFEL 169
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K+ ++G VGK++++ RF+++ F + STI D + I + L++ DTAGQ+
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIE-DQHSKHIAAFHRDYHLRVTDTAGQQE 73
Query: 245 F 247
+
Sbjct: 74 Y 74
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +1
Query: 289 MLVYDVTNEKSFEN---IKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAI 459
+L+Y VTN++SF I ++ ++ NA A+ M++GNK D +S+R+VS G+++A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVAT 72
Query: 460 EYQIKFVETSAKDSLNVNMHF 522
+ F+ETSAK++ N+ F
Sbjct: 73 NMECGFIETSAKNNENITELF 93
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/76 (31%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA-SADVEKMILGNKCDLDSQRQVSKER 441
Y R + ++VYDVT+ +FE+++ W+++++ ++ + D ++GNK DL +R+V++
Sbjct: 125 YMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAE 184
Query: 442 GEQLAIEYQIKFVETS 489
G+ +A + KF E S
Sbjct: 185 GKAMAAKINAKFFELS 200
Score = 58.4 bits (135), Expect = 5e-09
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKK----VKLQIWDTA 232
K++++GDSGVGKTSI++R A +TIG F + D + V+LQ+WDTA
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 233 GQERFR 250
GQERFR
Sbjct: 114 GQERFR 119
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65
Query: 245 F 247
+
Sbjct: 66 Y 66
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65
Query: 245 F 247
+
Sbjct: 66 Y 66
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YYR + G +LV+ + +FEN+K +I +V +++GNK DL RQV +
Sbjct: 71 YYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEA 130
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHF 522
A + +I + ETSA+ + NV+ F
Sbjct: 131 HNFAEKLKIPYFETSARLNQNVSEVF 156
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/62 (29%), Positives = 41/62 (66%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+K++++G+ GVGK+++ ++ + F ++ +TI ++ + +D + +L+I DTAG E
Sbjct: 4 YKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYR-KLSKVDAENARLEILDTAGTE 62
Query: 242 RF 247
+F
Sbjct: 63 QF 64
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLDSQRQVSK 435
Y G+ + LVYDVTN KSFEN +W+ +++N + V+ +++GNK DL+ +R VS
Sbjct: 105 YLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSV 164
Query: 436 ERGEQLAIEYQIKFVETSAKDSLNVNMHF 522
E + A + SAK V + F
Sbjct: 165 EAHKNFATSNDMMPTYVSAKTGDTVFLTF 193
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +2
Query: 53 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDT 229
D + K++++GD GKTSI RF++++F+ S+ T+G+DF R I L + +V +Q+WD
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 230 AGQ 238
GQ
Sbjct: 93 GGQ 95
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKER 441
Y R G +LV+ V KSFEN+ N+ I S DV +++GNKCDL S R V
Sbjct: 71 YMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL-SSRSVDFRT 129
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ A Y I V+TSAK + V+ F
Sbjct: 130 VSETAKGYGIPNVDTSAKTRMGVDEAF 156
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+KL+++GD GVGK+++ + ++ F + TI ++ + + +DG+ L I DTAGQE
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 62
Query: 242 RF 247
+
Sbjct: 63 EY 64
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKER 441
Y R G +LV+ V KSFEN+ N+ I S DV +++GNKCDL S R V
Sbjct: 74 YMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL-SSRSVDFRT 132
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
+ A Y I V+TSAK + V+ F
Sbjct: 133 VSETAKGYGIPNVDTSAKTRMGVDEAF 159
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
+KL+++GD GVGK+++ + ++ F + TI ++ + + +DG+ L I DTAGQE
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 65
Query: 242 RF 247
+
Sbjct: 66 EY 67
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +2
Query: 62 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
FKL+L+GD G GKT+ + R F +++T+G++ + +++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQE 69
Query: 242 RF 247
+F
Sbjct: 70 KF 71
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/86 (24%), Positives = 44/86 (51%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YY ++++DVT +++N+ NW R++ ++ ++ GNK D+ R+V K +
Sbjct: 78 YYIQGQCAIIMFDVTARVTYKNVPNWHRDL-ARVCENIPIVLCGNKVDV-KDRKV-KAKT 134
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHF 522
+ +++ + SAK + N F
Sbjct: 135 ITFHRKKNLQYYDISAKSNYNFEKPF 160
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKER 441
Y R G ++V+ VT+ SFE +K I D +IL GNK DL+++R V++
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHE 144
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
E+LA I ++E SAK NV+ F
Sbjct: 145 AEELAHRLSIPYLECSAKIRKNVDEAF 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +2
Query: 41 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 220
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 221 WDTAGQERFRTKQQ 262
DTAGQE F T ++
Sbjct: 70 LDTAGQEEFSTMRE 83
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKER 441
Y R G ++V+ VT+ SFE +K I D +IL GNK DL+++R V++
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHE 144
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
E+LA I ++E SAK NV+ F
Sbjct: 145 AEELAHRLSIPYLECSAKIRKNVDEAF 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +2
Query: 41 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 220
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 221 WDTAGQERFRTKQQ 262
DTAGQE F T ++
Sbjct: 70 LDTAGQEEFSTMRE 83
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKER 441
Y R G ++V+ VT+ SFE +K I D +IL GNK DL+++R V++
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHE 144
Query: 442 GEQLAIEYQIKFVETSAKDSLNVNMHF 522
E+LA I ++E SAK NV+ F
Sbjct: 145 AEELAHRLSIPYLECSAKIRKNVDEAF 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +2
Query: 41 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 220
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 221 WDTAGQERFRTKQQ 262
DTAGQE F T ++
Sbjct: 70 LDTAGQEEFSTMRE 83
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ D+F + ++ T+ ++ + + LDG V L +WDTAGQE
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQED 67
Query: 245 F 247
+
Sbjct: 68 Y 68
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ D+F + ++ T+ ++ + + LDG V L +WDTAGQE
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQED 67
Query: 245 F 247
+
Sbjct: 68 Y 68
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNI--EENASADVEKMILGNKCDLDSQRQVSKE 438
YYR G + V+ + + +SFE + I +N+ + V +++GNK D+ QR VS E
Sbjct: 85 YYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAE 144
Query: 439 RGEQLAIEYQIKFVETSAKDSLNVNMHF 522
Q A ++ +VETSAK NV+ F
Sbjct: 145 LCRQRAEQWGCHYVETSAKRRENVDKVF 172
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K++++G GVGK+++ +F D F + T ++ + + LDG++ + I DTAGQE
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVV-LDGEECSIDILDTAGQED 77
Query: 245 F 247
+
Sbjct: 78 Y 78
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDD 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDD 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKK----VKLQIWDTA 232
K++++GDSGVGKTSI++R A +TIG F + D + V+LQ+WDTA
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTA 113
Query: 233 GQ 238
GQ
Sbjct: 114 GQ 115
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = +1
Query: 289 MLVYDVTNEKSFENIKNWIRNIEENASA----DVEKMILGNKCDLDSQRQVSKERGEQLA 456
++VYDVT++ SF+ + + I + + +++GNK DL+ RQVS+ GE+LA
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
Query: 457 IEYQIKFVETSA 492
+++ +F E SA
Sbjct: 143 SQHKAQFAECSA 154
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = +2
Query: 50 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTI 187
Y LFK++L+ ++GVGKT ++ +F++ F +TIG+DF I+T+
Sbjct: 4 YKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTV 49
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 292 LVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ 468
+VY+V N +SF + + R + + +++GNK DL VSK G LA ++
Sbjct: 249 IVYNVDNRESFVCATDLLSRLLNRKIARGANIILIGNKIDLKRNTVVSKMEGACLAKVHK 308
Query: 469 IKFVETSAKDSLNVNMHFTL 528
FVE SA+ S+N++ +T+
Sbjct: 309 CNFVEVSAQYSMNISELWTI 328
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN---ASADVEKMILGNKC 405
YYR ++ VYDVT +SF ++ WI+ E++ ++V ++++GNKC
Sbjct: 17 YYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKC 66
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 60
Query: 245 F 247
+
Sbjct: 61 Y 61
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/75 (29%), Positives = 43/75 (57%)
Frame = +1
Query: 277 SMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLA 456
S GI+++Y V + +SF + + +E + + +++G+K D+ +R V+ G+QLA
Sbjct: 289 SNGIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLA 348
Query: 457 IEYQIKFVETSAKDS 501
I F+E S+K +
Sbjct: 349 RTLGIPFLEVSSKQN 363
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 37/61 (60%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
K +++GD VGKT +L ++ + F ++ T+ ++ + T + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TAMIGGEPYTLGLFDTAGQED 63
Query: 245 F 247
+
Sbjct: 64 Y 64
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/61 (29%), Positives = 40/61 (65%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
KL+++GD+ GKTS+L +++ F ++ +T+ ++ + ++ +D K + ++DTAGQ
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAV-SVHIDNKNYAVNLFDTAGQGN 64
Query: 245 F 247
+
Sbjct: 65 Y 65
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +2
Query: 41 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 220
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 221 WDTAGQERFRTKQQ 262
DTAGQE F T ++
Sbjct: 70 LDTAGQEEFSTMRE 83
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKE 438
Y R G ++V+ VT+ SFE +K I D +IL GNK DL+++R VS E
Sbjct: 85 YLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVSFE 143
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+IL++ +++ I T+G F + T+ K +K +WD GQ++
Sbjct: 15 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNIKFNVWDVGGQDK 69
Query: 245 FRTKQQH 265
R +H
Sbjct: 70 IRPLWRH 76
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+ L++G G GKT+IL++ + ++ I TIG F + T+ +K+ L +WD GQ++
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIG--FNVETVTF--QKITLTVWDVGGQKK 73
Query: 245 FR 250
R
Sbjct: 74 IR 75
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G G GKT+IL+R ++ I TIG F + ++ K +K Q+WD GQ
Sbjct: 18 RILILGLDGAGKTTILYRLQVGEV-VTTIPTIG--FNVEQVEY--KNLKFQVWDLGGQTS 72
Query: 245 FR 250
R
Sbjct: 73 IR 74
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 245 FRTKQQH 265
R +H
Sbjct: 74 IRPLWRH 80
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 245 FRTKQQH 265
R +H
Sbjct: 74 IRPLWRH 80
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 245 FRTKQQH 265
R +H
Sbjct: 74 IRPLWRH 80
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Frame = +2
Query: 59 LFKLLLIGDSGVGKTSILFRFS---------EDAFNISFISTIGIDFKIRTIDLDGKKVK 211
L K++++GDSGVGKTS++ ++ F + +TIG DF R +++D + V
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVT 68
Query: 212 LQ 217
LQ
Sbjct: 69 LQ 70
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 289 MLVYDVTNEKSF---ENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAI 459
+++Y++ N +SF I I N ++ ++GNKCDL + +S G+ +A
Sbjct: 248 IVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVISTNEGKSVAR 307
Query: 460 EYQIKFVETSAKDSLNVNMHFT 525
++ F+E SA +N +T
Sbjct: 308 TFKCDFLEVSALLGMNTEETWT 329
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
++L++G GKT+++ +F ++ + + T+G D I+T+ K +L +WD GQ+
Sbjct: 18 RILILGLDNAGKTTLMKKFLDEPTD-TIEPTLGFD--IKTVHF--KDFQLNLWDVGGQKS 72
Query: 245 FRTKQQH----TTVVLWELCLSTMLRMRRALKTLRIGLG 349
R+ ++ T ++W + S R+ + + L+ LG
Sbjct: 73 LRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLG 111
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 71 LLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFK 175
L+IG+SGVGK+S++ RF +D + +IG+ F+
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPFR 35
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+L L+G GKT+ + + F I T+G F +R I +KL WD GQ R
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPR 77
Query: 245 FRT 253
FR+
Sbjct: 78 FRS 80
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+L L+G GKT+ + + F I T+G F +R I +KL WD GQ R
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPR 77
Query: 245 FRT 253
FR+
Sbjct: 78 FRS 80
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 244
+++L+G G GKTSI+ R + + I F I TI K +L WD G +
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHY--KNYRLNFWDVGGLPK 428
Query: 245 FRTKQQH 265
R +H
Sbjct: 429 LRHLWKH 435
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 35.5 bits (78), Expect = 0.042
Identities = 11/31 (35%), Positives = 24/31 (77%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 357
++ G++G +LV+D+TN++S EN+ W+ ++
Sbjct: 86 FFEGAVGAILVHDLTNKRSEENLATWLTMLD 116
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 34.7 bits (76), Expect = 0.074
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRF-SEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 241
++LL+G GKT+IL + SED +++ T G F ++T+ G ++L +WD GQ
Sbjct: 19 RILLLGLDNAGKTTILKQLSSEDVQHVT--PTKG--FNVKTVAAMG-DIRLNVWDIGGQR 73
Query: 242 RFR 250
R
Sbjct: 74 SIR 76
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 34.7 bits (76), Expect = 0.074
Identities = 18/78 (23%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 MLVYDVTNEKSFENIKNWIRNIEENASA--DVEKMILGNKCDLDSQRQVSKERGEQLA-- 456
+LV+ V + SF+ + + + I S ++ +++GNKCD+++ +++ +E +
Sbjct: 91 LLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDVEN-KKIYEETAKAFTNR 149
Query: 457 IEYQIKFVETSAKDSLNV 510
+ ++++E SAKD++ +
Sbjct: 150 LSSDVRYIEVSAKDNIRI 167
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/86 (23%), Positives = 43/86 (50%)
Frame = +1
Query: 265 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 444
YY ++++DVT +++N+ NW ++ ++ ++ GNK D+ R+V K +
Sbjct: 12 YYIQGQCAIIMFDVTARVTYKNVPNWHHDL-ARVCENIPIVLCGNKVDV-KDRKV-KAKT 68
Query: 445 EQLAIEYQIKFVETSAKDSLNVNMHF 522
+ +++ + SAK + N F
Sbjct: 69 ITFHRKKNLQYYDISAKSNYNFEKPF 94
>Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical
protein ZK669.5b protein.
Length = 176
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 47 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 169
+YD +FK L+ G VGK ++L F + N S +++ +D
Sbjct: 7 SYDRVFKFLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVD 47
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 47 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 169
+YD +FK L+ G VGK ++L F + N S +++ +D
Sbjct: 7 SYDRVFKFLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVD 47
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +1
Query: 268 YRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVS 432
Y+G+ G++ V+D+T ++E ++ I + + ++L N+ D+ RQV+
Sbjct: 143 YKGTNGVIFVFDITKTWTWEYVQKEIVKVPNK----IPVLVLANRRDMGHHRQVT 193
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +2
Query: 41 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 220
A T +K+ ++GD+G GK+S++ + + +F I +I + G + L
Sbjct: 231 ASTSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAFADEIQDYENTVSICIGGVECDLVF 290
Query: 221 WDT-AGQERFRTKQQHTTVVLWEL-CLSTMLRMRRALKTLRIGLGTLKRMPVLM 376
+++ + T + H +V++ + S+ + AL+ +R GT + +P L+
Sbjct: 291 FESDMSDPCWLTNEIHAFLVVYSIDSKSSWKQAMVALEMIRDRPGT-RNLPTLV 343
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/51 (23%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 289 MLVYDVTNEKSFENIKNWIRNIEEN-ASADVEKMILGNKCDLDSQRQVSKE 438
++VY + ++ S++ + I + + ++ ++ GNK DL+ +R V+K+
Sbjct: 309 LVVYSIDSKSSWKQAMVALEMIRDRPGTRNLPTLVAGNKIDLERKRTVTKQ 359
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 128 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+A S I + G+ IR+ D+DG+ +KL+ WD
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WD 458
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 128 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+A S I + G+ IR+ D+DG+ +KL+ WD
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WD 458
>AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protein
805, isoform d protein.
Length = 908
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 128 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+A S I + G+ IR+ D+DG+ +KL+ WD
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WD 458
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 128 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+A S I + G+ IR+ D+DG+ +KL+ WD
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WD 458
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 128 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 226
+A S I + G+ IR+ D+DG+ +KL+ WD
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WD 458
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSED 130
+++LIGD G GKTS++ ED
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLED 32
>Z73975-3|CAA98277.2| 269|Caenorhabditis elegans Hypothetical
protein F57A8.1 protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 528 LARDIKAKMEKKQEASNPSGGRSGVHKPTLNDARKPVTWLSR 653
LA A+ ++EAS+PS G+ G H+ + A P+ W R
Sbjct: 131 LATPTPARRRLREEASSPSPGKRG-HEESNPMADHPIAWRLR 171
>Z70781-8|CAA94836.2| 269|Caenorhabditis elegans Hypothetical
protein F57A8.1 protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 528 LARDIKAKMEKKQEASNPSGGRSGVHKPTLNDARKPVTWLSR 653
LA A+ ++EAS+PS G+ G H+ + A P+ W R
Sbjct: 131 LATPTPARRRLREEASSPSPGKRG-HEESNPMADHPIAWRLR 171
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 65 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIG--IDFKIRTIDLDGKKVKLQIWDTAGQ 238
K+LL+G SG GKTS+ + + S +G I+ + + G V L +WD GQ
Sbjct: 6 KVLLMGKSGSGKTSMRSIIFAN-YIARDCSRLGPTIEVEHAHVKFLGNMV-LHLWDCGGQ 63
Query: 239 ERF 247
E F
Sbjct: 64 ESF 66
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 313 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 492
++ F+ I+ WI+ E ADVE + NK D ++ K R ++LA + I T
Sbjct: 1241 DEQFDTIRQWIKERTEALEADVE---VSNKTKPDDIERMQK-RHDELASD--INDYHTIY 1294
Query: 493 KDSLN 507
+D LN
Sbjct: 1295 EDFLN 1299
>Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical
protein C01A2.1 protein.
Length = 465
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 268 YRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 408
Y G I +Y ++ S E +KNW + E ++ ++ N+CD
Sbjct: 91 YEGLPEITTLYRTLSQTSSEKMKNWRKLEEIRSTLTALFIVFTNECD 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,082,294
Number of Sequences: 27780
Number of extensions: 389934
Number of successful extensions: 1507
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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